G316756


Basic Information

Item Value
gene id G316756
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 8376785 ~ 8377093 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU375146
CACTTACAGgggaagtgaataacattgatcaTCTCGTTACAATGGTACCTcgtaaggatctgagcgactttggcAAGGtccagattgtgatggctagacgactgggtaagagcatctccaaaacttGTGGGGTGTTCATGTTatacagtggttagtacctaccaaaagtagtccaaggaagaacaaccggtgaaccagcgacagggtcatgggtttTCAAGGCTAagtgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU375146 True 231 lncRNA 0.46 2 8376785 8377093

Neighbor

gene id symbol gene type direction distance location
dip2cb LOC108280427,LOC108428306,LOC107721715,LOC107663347,LOC107659260,LOC107749093 coding upstream 49276 8275578 ~ 8327509 (+)
myo10 myo10,LOC107602648,LOC107749189 coding upstream 119124 8193755 ~ 8257661 (+)
adcy8 adcy8,LOC107569488,LOC107557810,LOC107659784,LOC107663336 coding upstream 246303 8070565 ~ 8130482 (+)
oc90 NA coding upstream 402789 7957043 ~ 7973996 (+)
LOC113543381 hhla1 coding upstream 423449 7941078 ~ 7953336 (+)
slco5a1b LOC108280428 coding downstream 9419 8386512 ~ 8422245 (+)
lactb2 lactb2 coding downstream 50726 8427819 ~ 8432247 (+)
slco5a1a LOC108280436,LOC108428320,LOC107721727,LOC107566986,LOC107690218,LOC107602641 coding downstream 60288 8437381 ~ 8462127 (+)
adhfe1 adhfe1 coding downstream 90289 8467382 ~ 8476972 (+)
LOC113543002 LOC108280206 coding downstream 126922 8504015 ~ 8505230 (+)
G316754 NA non-coding upstream 43254 8332424 ~ 8333531 (+)
G316752 NA non-coding upstream 44999 8331506 ~ 8331786 (+)
LOC113543009 NA non-coding upstream 115073 8259258 ~ 8261712 (+)
G316741 NA non-coding upstream 117715 8258829 ~ 8259070 (+)
G316630 NA non-coding upstream 332088 8044493 ~ 8044697 (+)
G317008 NA non-coding downstream 210902 8587995 ~ 8588211 (+)
G317027 NA non-coding downstream 284193 8661286 ~ 8661776 (+)
G317031 NA non-coding downstream 312342 8689435 ~ 8691471 (+)
G317045 NA non-coding downstream 349248 8726341 ~ 8730818 (+)
G317113 NA non-coding downstream 416621 8793714 ~ 8793944 (+)
G316745 NA other upstream 107587 8268709 ~ 8269198 (+)
G316744 NA other upstream 112724 8263339 ~ 8264061 (+)
fitm1 fitm1,LOC107688462,LOC107585187,LOC107722554,LOC107589905 other upstream 619824 7751694 ~ 7756961 (+)
G316413 NA other upstream 680866 7695534 ~ 7695919 (+)
crsp7 LOC108280732 other upstream 778621 7582313 ~ 7598164 (+)
LOC117599964 LOC107387363,LOC107676291,LOC107756568 other downstream 434502 8811595 ~ 8813410 (+)
G317390 NA other downstream 1035230 9412323 ~ 9415164 (+)
pip4p1a tmem55b,tmem55ba,LOC106600488 other downstream 1581900 9958993 ~ 9977916 (+)
capn10 capn10 other downstream 2159338 10536431 ~ 10562994 (+)
eif4e2 eif4e2,LOC107600102,LOC107579667,LOC107749152,LOC107730458 other downstream 2186728 10563821 ~ 10568907 (+)

Expression


Co-expression Network