Gene
RNA
| Item | Value |
|---|---|
| gene id | G335896 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 125194 ~ 142530 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU397771 | True | 359 | lncRNA | 0.62 | 2 | 125194 | 142530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fkbp10a | LOC108257211 | coding | upstream | 36679 | 55108 ~ 88515 (+) |
| LOC113529063 | LOC108256844,LOC108256868,LOC108256846,LOC108262172 | coding | downstream | 37286 | 179816 ~ 180757 (+) |
| LOC113529056 | LOC108262172 | coding | downstream | 49423 | 191953 ~ 192894 (+) |
| LOC113529062 | LOC108256868,LOC108256847,LOC108256843,LOC108256846,LOC108262172 | coding | downstream | 62194 | 204724 ~ 205665 (+) |
| LOC113529061 | LOC108256842,LOC108256840,LOC108256799,LOC108262172 | coding | downstream | 83223 | 225753 ~ 226697 (+) |
| LOC113529060 | LOC108262172 | coding | downstream | 86531 | 229061 ~ 230002 (+) |
| G335887 | LOC108257212 | non-coding | upstream | 71377 | 50894 ~ 53817 (+) |
| G335882 | NA | non-coding | upstream | 95046 | 29943 ~ 30148 (+) |
| G335876 | NA | non-coding | upstream | 104186 | 14878 ~ 21008 (+) |
| G336016 | NA | non-coding | downstream | 70616 | 213146 ~ 270883 (+) |
| G336041 | NA | non-coding | downstream | 211500 | 354030 ~ 404443 (+) |
| G336078 | NA | non-coding | downstream | 297909 | 440439 ~ 440785 (+) |
| G336111 | NA | non-coding | downstream | 450786 | 593316 ~ 593539 (+) |
| G336126 | NA | non-coding | downstream | 471742 | 614272 ~ 620153 (+) |
| G336034 | NA | other | downstream | 144319 | 286849 ~ 287215 (+) |
| G336161 | LOC108257052 | other | downstream | 596839 | 739369 ~ 749674 (+) |
| G336172 | NA | other | downstream | 651587 | 794117 ~ 794695 (+) |
| G336213 | NA | other | downstream | 831139 | 973669 ~ 976321 (+) |
| mllt11 | mllt11 | other | downstream | 990425 | 1132955 ~ 1136124 (+) |
