Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000251 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 8572936 ~ 8575124 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000251 | False | 312 | mRNA | 0.48 | 2 | 8573020 | 8574704 |
| TU187549 | True | 898 | lncRNA | 0.42 | 2 | 8572936 | 8575124 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000244 | NA | coding | upstream | 3266 | 8567467 ~ 8569670 (+) |
| AMCG00000246 | NA | coding | upstream | 22077 | 8527438 ~ 8550859 (+) |
| AMCG00000250 | NA | coding | upstream | 47712 | 8519864 ~ 8525224 (+) |
| AMCG00000245 | NA | coding | upstream | 89239 | 8473574 ~ 8483697 (+) |
| AMCG00000248 | NA | coding | upstream | 115648 | 8442303 ~ 8457288 (+) |
| AMCG00000252 | gjd2,gjd2b | coding | downstream | 10780 | 8585904 ~ 8587355 (+) |
| AMCG00000256 | NA | coding | downstream | 327783 | 8902907 ~ 8906396 (+) |
| AMCG00000255 | samd4a | coding | downstream | 349273 | 8924397 ~ 8945589 (+) |
| AMCG00000258 | gnpnat1 | coding | downstream | 422008 | 8997132 ~ 9004514 (+) |
| AMCG00000259 | NA | coding | downstream | 443538 | 9018662 ~ 9024727 (+) |
| G149001 | NA | non-coding | upstream | 616547 | 7955972 ~ 7956389 (+) |
| G148961 | NA | non-coding | upstream | 813339 | 7759369 ~ 7759597 (+) |
| G148919 | NA | non-coding | upstream | 888839 | 7683878 ~ 7684097 (+) |
| G148791 | NA | non-coding | upstream | 1480476 | 7092025 ~ 7092460 (+) |
| G148768 | NA | non-coding | upstream | 1637776 | 6933300 ~ 6935160 (+) |
| G149055 | NA | non-coding | downstream | 8524 | 8583648 ~ 8584007 (+) |
| G149056 | NA | non-coding | downstream | 9364 | 8584488 ~ 8584967 (+) |
| G149059 | NA | non-coding | downstream | 93856 | 8668980 ~ 8673786 (+) |
| G149172 | psmc6 | non-coding | downstream | 438247 | 9013371 ~ 9016151 (+) |
| G149253 | NA | non-coding | downstream | 704939 | 9280063 ~ 9285151 (+) |
| AMCG00000217 | gpx2 | other | upstream | 1210229 | 7359278 ~ 7362707 (+) |
| AMCG00000215 | max,LOC107668248,LOC103457350 | other | upstream | 1248485 | 7313872 ~ 7324451 (+) |
| AMCG00000216 | srsf5b,srsf5,LOC107093669,LOC100707620,LOC102304179,LOC102202212,LOC103457348,LOC105936365,LOC105024333,LOC107756601,LOC107602033,LOC103029514,LOC103359433,LOC108233477 | other | upstream | 1275971 | 7290666 ~ 7296965 (+) |
| AMCG00000198 | LOC106586563 | other | upstream | 2052073 | 6500893 ~ 6520863 (+) |
| AMCG00000201 | NA | other | upstream | 2098704 | 6469345 ~ 6474232 (+) |
| AMCG00000249 | acta1,actc1,LOC103383882,LOC105024319 | other | downstream | 4593 | 8579717 ~ 8585273 (+) |
| AMCG00000285 | map4k5 | other | downstream | 864937 | 9440061 ~ 9486689 (+) |
| AMCG00000286 | sos2 | other | downstream | 939698 | 9514822 ~ 9546411 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | downstream | 986433 | 9561557 ~ 9591088 (+) |
| G149424 | NA | other | downstream | 1394200 | 9969324 ~ 9970801 (+) |
