AMCG00000821


Basic Information

Item Value
gene id AMCG00000821
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 4401739 ~ 4404141 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000821
ATGACTGCAGTGAAAGAGGAACTCGGATTGCTTGGTACACAGTATCGGAAGTCCTGTGCCTCTTCCGCGGCCTGCCTTATTGCCTCGTCAGGCTATCAGCAGTTCTGCACGGGGAAACTGAACTCCGTCTGCATCAGCTGCTGCAACACCCCGCTGTGCAACGGGCCCAAGCAGAAAAAGAGGCCCAACTCATCGGTGGCACCCGCCAGCCAGCTGCACGGCTCCCTCTTGTTGTTGTCTCTTCTACTAGCCAACCTGCTGACATAG

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000821 True 267 mRNA 0.57 2 4401739 4404141

Neighbor

gene id symbol gene type direction distance location
AMCG00000817 NA coding downstream 14019 4380615 ~ 4387720 (-)
AMCG00000818 actr3,LOC107660280,LOC106575261,LOC104923131,LOC101155832 coding downstream 75162 4317018 ~ 4326577 (-)
AMCG00000813 NA coding downstream 312843 4067944 ~ 4088896 (-)
AMCG00000810 ddx18,LOC107673737 coding downstream 460424 3934797 ~ 3941315 (-)
AMCG00000809 htr5a,htr5ab,LOC107684958,LOC107550720 coding downstream 468439 3930277 ~ 3933300 (-)
AMCG00000820 NA coding upstream 25606 4429747 ~ 4464744 (-)
AMCG00000825 LOC107714772,LOC106574437,LOC104928565,LOC106575257 coding upstream 242820 4646961 ~ 4651113 (-)
AMCG00000824 NA coding upstream 265127 4669268 ~ 4683641 (-)
AMCG00000836 NA coding upstream 460059 4864200 ~ 4938788 (-)
AMCG00000835 arl5a,LOC107555355 coding upstream 540076 4944217 ~ 4954174 (-)
G126369 NA non-coding downstream 156698 4244729 ~ 4245041 (-)
G126296 NA non-coding downstream 724812 3674281 ~ 3676927 (-)
G126275 NA non-coding downstream 848762 3550840 ~ 3552977 (-)
G126037 NA non-coding downstream 1843490 2557991 ~ 2558249 (-)
G126020 NA non-coding downstream 1939251 2460715 ~ 2462488 (-)
G126428 NA non-coding upstream 233226 4637367 ~ 4637640 (-)
G126429 NA non-coding upstream 233817 4637958 ~ 4638285 (-)
G126430 NA non-coding upstream 236917 4641058 ~ 4641341 (-)
G126432 NA non-coding upstream 238539 4642680 ~ 4643466 (-)
G126445 NA non-coding upstream 298998 4703139 ~ 4708851 (-)
AMCG00000804 NA other downstream 745178 3553047 ~ 3656561 (-)
G126096 NA other downstream 1252487 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 1261250 3133876 ~ 3140489 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other downstream 1351723 3044167 ~ 3050016 (-)
G126089 NA other downstream 1359775 3036931 ~ 3041964 (-)
G126427 NA other upstream 231955 4636096 ~ 4636516 (-)
AMCG00000838 cacnb4,LOC108434427 other upstream 552997 4957138 ~ 4982651 (-)
G126700 NA other upstream 1168564 5572705 ~ 5573027 (-)
AMCG00000888 LOC102209482 other upstream 2285427 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 3225774 7629915 ~ 7645722 (-)

Expression


Co-expression Network