AMCG00001401 (map4k3)


Basic Information

Item Value
gene id AMCG00001401
gene name map4k3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 2271897 ~ 2279797 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001401
GGCTTTGTTCTTGATGACAAAAAGTAATTTCCAGCCTCCCAAACTGAAAGACAAGATTAAATGgACGAACAATTTCCACCATTTCGTTAAAATGTCCCTGACGAAAAATCCTAAGAAAAGGCCTACGGCAGAGAAACTGTTACAGCATCCTTATGTTACACAGCCCCTGAGTCGGACACTTGCCATCGAGTTGCTGGACAAGGCTAATAATCCTGACCACACCACTTTCCACGAATTTGATGACGATGATCCGGAGccCCCTGTTGTCGTGCCTCATCGGATTCATTCGACTAGCAGAAATGCCCGAGAAGAGAAGACGCGCTCTGAAATA

Function

symbol description
map4k3 Enables ATP binding activity and protein serine/threonine kinase activity. Involved in several processes, including protein phosphorylation; response to UV; and response to tumor necrosis factor.

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001401 True 331 mRNA 0.46 4 2271897 2279797

Neighbor

gene id symbol gene type direction distance location
AMCG00001402 LOC106608247 coding downstream 20138 2221167 ~ 2251759 (-)
AMCG00001409 sos1,LOC106564790 coding downstream 104553 2110416 ~ 2167344 (-)
AMCG00001408 dhx57,LOC106577153,LOC107081174,LOC107589582 coding downstream 226459 2021959 ~ 2045438 (-)
AMCG00001398 NA coding downstream 403797 1867328 ~ 1868100 (-)
AMCG00001397 NA coding downstream 561564 1656248 ~ 1710333 (-)
AMCG00001404 NA coding upstream 117585 2397382 ~ 2407103 (-)
AMCG00001405 NA coding upstream 222373 2502170 ~ 2503363 (-)
AMCG00001428 slc8a1 coding upstream 321029 2600826 ~ 2601227 (-)
AMCG00001427 LOC108269811,LOC108270202 coding upstream 530487 2810284 ~ 2811279 (-)
AMCG00001411 NA coding upstream 827398 3107195 ~ 3108027 (-)
G157362 NA non-coding downstream 364134 1907559 ~ 1907763 (-)
G157358 NA non-coding downstream 418608 1853013 ~ 1853289 (-)
G157353 NA non-coding downstream 446273 1824197 ~ 1825624 (-)
G157329 NA non-coding downstream 523035 1748546 ~ 1748862 (-)
G157326 NA non-coding downstream 573835 1697837 ~ 1698062 (-)
G157463 NA non-coding upstream 139731 2419528 ~ 2419741 (-)
G157476 NA non-coding upstream 230319 2510116 ~ 2512566 (-)
G157478 NA non-coding upstream 237825 2517622 ~ 2517976 (-)
G157482 NA non-coding upstream 264951 2544748 ~ 2545008 (-)
G157484 NA non-coding upstream 291073 2570870 ~ 2571119 (-)
AMCG00001396 srsf7 other downstream 252033 2002361 ~ 2019864 (-)
G157339 NA other downstream 483055 1750051 ~ 1788842 (-)
AMCG00001385 NA other downstream 1678430 474733 ~ 593467 (-)
G157593 NA other upstream 942880 3222677 ~ 3259955 (-)
G157671 NA other upstream 1209970 3489767 ~ 3492710 (-)
AMCG00001416 LOC107564242 other upstream 1239078 3518875 ~ 3521708 (-)
AMCG00001426 NA other upstream 1594241 3874038 ~ 3896079 (-)
G158123 NA other upstream 3097633 5377430 ~ 5418243 (-)

Expression


Co-expression Network