AMCG00001426


Basic Information

Item Value
gene id AMCG00001426
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 3874038 ~ 3896079 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001426
ATGATCGAATCCAGGGCCCGGCACGTCCTTCAAGCGCTGGCCAATCAGCACTGGGCTCCGGAGGTCAAAGGCATTGAACTCCCCAGTTCCATATGGCCTTGTCAGGTGAaaacaggattaacacatgaagCTCCCAATCAGGCCATCTGGACTTCTCAAGCGCTTCCTAATGGAGTGAGCTTCTCGCTGACCAGTCCAGATGGTGATCAGGGCTACCCTGGGGAGCTGCGGGCACAGGTGACCTATGAACTGGCAGGAGAGGTGCTGACAGTGCAGTTCACAGCAGAGGCTAGCAGGACCACTCCCATCAACCTCACCAACCACTCCTATTTCAACCTGGCTGGACACGCTGCCCCTGACATCTATGATCATGAAGTCTCCATCCCAGCAGAAGCATATCTGCCCGTTGACGACACCATGATTCCAACAGGCTTGCACTTGATCTACATTCAGCACCTCATCTTCGCCCTGATGCCCCTCAACCGTGTCGCACTGTGA
>TU198700
GGTATACATCTGAATTATACATTATAGCAACAACATAAACATGCATTAAACCATAGAACCGTGCCTATTTCCCTTTAATAACTTCAATATTAAATCAAGTAAGCAGAAACTGAACTTCAGTTGTTTGTTGCAAACTGGGTGCACATCCTTAGACCATTTCCCCCTTAACACCTGGAGGACAAGAGAAATGGCTTTGACGAAGCCATCTGGACTTCTCAAGCGCTTCCTAATGGAGTGAGCTTCTCGCTGACCAGTCCAGATGGTGATCAGGGCTACCCTGGGGAGCTGCGGGCACAGGTGACCTATGAACTGGCAGGAGAGGTGCTGACAGTGCAGTTCACAGCAGAGGCTAGCAGGACCACTCCCATCAACCTCACCAACCACTCCTATTTCAACCTGGCTGGACACGCTGCCCCTGACATCTATGATCATGAAGTCTCCATCCCAGCAGAAGCATATCTGCCCGTTGACGACACCATGATTCCAACAGGTCAGTTAAAGCCCCCGTGCTGAAG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001426 False 498 mRNA 0.55 5 3874038 3888415
TU198700 True 515 lncRNA 0.48 3 3882367 3896079

Neighbor

gene id symbol gene type direction distance location
AMCG00001425 hnrnpll,LOC105006898,LOC106577097 coding downstream 31407 3825451 ~ 3842631 (-)
AMCG00001424 LOC108441890 coding downstream 72553 3779562 ~ 3801485 (-)
AMCG00001423 gpr137b,LOC105902257,LOC102792340,LOC104924458 coding downstream 274581 3589190 ~ 3599457 (-)
AMCG00001418 NA coding downstream 365487 3507876 ~ 3508551 (-)
AMCG00001419 NA coding downstream 366205 3491994 ~ 3507833 (-)
AMCG00001442 crip3 coding upstream 307852 4203931 ~ 4226910 (-)
AMCG00001449 NA coding upstream 474446 4370525 ~ 4371684 (-)
AMCG00001444 LOC106577203 coding upstream 519434 4415513 ~ 4436845 (-)
AMCG00001443 LOC108411957,LOC107753489,LOC108270513,LOC105026838,LOC106564801,LOC103369331 coding upstream 575002 4471081 ~ 4484279 (-)
AMCG00001454 NA coding upstream 619305 4515384 ~ 4516307 (-)
G157763 NA non-coding downstream 102155 3769786 ~ 3771883 (-)
G157696 NA non-coding downstream 308541 3555480 ~ 3565497 (-)
G157680 NA non-coding downstream 367546 3506280 ~ 3506492 (-)
G157664 NA non-coding downstream 396444 3475624 ~ 3477594 (-)
G157646 NA non-coding downstream 431685 3436345 ~ 3442353 (-)
G157798 NA non-coding upstream 18034 3914113 ~ 3916135 (-)
G157850 NA non-coding upstream 199156 4095235 ~ 4153448 (-)
G157911 NA non-coding upstream 367847 4263926 ~ 4269860 (-)
G157970 NA non-coding upstream 755259 4651338 ~ 4652006 (-)
G158017 rtn4 non-coding upstream 1018710 4914789 ~ 4934873 (-)
AMCG00001416 LOC107564242 other downstream 352330 3518875 ~ 3521708 (-)
G157671 NA other downstream 381328 3489767 ~ 3492710 (-)
G157593 NA other downstream 614083 3222677 ~ 3259955 (-)
AMCG00001396 srsf7 other downstream 1854174 2002361 ~ 2019864 (-)
G157339 NA other downstream 2085196 1750051 ~ 1788842 (-)
G158123 NA other upstream 1481351 5377430 ~ 5418243 (-)
AMCG00001483 NA other upstream 1545548 5441627 ~ 5443581 (-)
G158207 NA other upstream 1699305 5595384 ~ 5597839 (-)
AMCG00001487 NA other upstream 1761883 5657962 ~ 5746325 (-)
AMCG00001491 NA other upstream 1984105 5880184 ~ 5882320 (-)

Expression


Co-expression Network