Gene
RNA
| Item | Value |
|---|---|
| gene id | G157593 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 3222677 ~ 3259955 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko00280 | Valine, leucine and isoleucine degradation |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU198465 | True | 329 | TUCP | 0.51 | 3 | 3222677 | 3259955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001413 | mrps5,LOC102775872 | coding | downstream | 26849 | 3188173 ~ 3195828 (-) |
| AMCG00001411 | NA | coding | downstream | 114650 | 3107195 ~ 3108027 (-) |
| AMCG00001427 | LOC108269811,LOC108270202 | coding | downstream | 411398 | 2810284 ~ 2811279 (-) |
| AMCG00001428 | slc8a1 | coding | downstream | 621450 | 2600826 ~ 2601227 (-) |
| AMCG00001405 | NA | coding | downstream | 719314 | 2502170 ~ 2503363 (-) |
| AMCG00001412 | NA | coding | upstream | 9042 | 3268997 ~ 3275615 (-) |
| AMCG00001414 | NA | coding | upstream | 16289 | 3276244 ~ 3277831 (-) |
| AMCG00001417 | NA | coding | upstream | 229139 | 3489094 ~ 3490120 (-) |
| AMCG00001419 | NA | coding | upstream | 232039 | 3491994 ~ 3507833 (-) |
| AMCG00001418 | NA | coding | upstream | 247921 | 3507876 ~ 3508551 (-) |
| G157578 | LOC100846954 | non-coding | downstream | 37523 | 3184728 ~ 3185154 (-) |
| G157549 | NA | non-coding | downstream | 151303 | 3071159 ~ 3071374 (-) |
| G157546 | NA | non-coding | downstream | 169228 | 3053183 ~ 3053449 (-) |
| G157535 | NA | non-coding | downstream | 392496 | 2829268 ~ 2830181 (-) |
| G157534 | NA | non-coding | downstream | 405711 | 2784015 ~ 2816966 (-) |
| G157624 | NA | non-coding | upstream | 104666 | 3364621 ~ 3377794 (-) |
| G157633 | NA | non-coding | upstream | 134290 | 3394245 ~ 3398019 (-) |
| G157647 | NA | non-coding | upstream | 151682 | 3411637 ~ 3414248 (-) |
| G157646 | NA | non-coding | upstream | 176390 | 3436345 ~ 3442353 (-) |
| G157664 | NA | non-coding | upstream | 215669 | 3475624 ~ 3477594 (-) |
| AMCG00001396 | srsf7 | other | downstream | 1202813 | 2002361 ~ 2019864 (-) |
| G157339 | NA | other | downstream | 1433835 | 1750051 ~ 1788842 (-) |
| AMCG00001385 | NA | other | downstream | 2629210 | 474733 ~ 593467 (-) |
| G157671 | NA | other | upstream | 229812 | 3489767 ~ 3492710 (-) |
| AMCG00001416 | LOC107564242 | other | upstream | 258920 | 3518875 ~ 3521708 (-) |
| AMCG00001426 | NA | other | upstream | 614083 | 3874038 ~ 3896079 (-) |
| G158123 | NA | other | upstream | 2117475 | 5377430 ~ 5418243 (-) |
| AMCG00001483 | NA | other | upstream | 2181672 | 5441627 ~ 5443581 (-) |
