Gene
RNA
| Item | Value |
|---|---|
| gene id | G157546 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 3053183 ~ 3053449 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU198412 | True | 267 | lncRNA | 0.37 | 1 | 3053183 | 3053449 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001427 | LOC108269811,LOC108270202 | coding | downstream | 241904 | 2810284 ~ 2811279 (-) |
| AMCG00001428 | slc8a1 | coding | downstream | 451956 | 2600826 ~ 2601227 (-) |
| AMCG00001405 | NA | coding | downstream | 549820 | 2502170 ~ 2503363 (-) |
| AMCG00001404 | NA | coding | downstream | 646080 | 2397382 ~ 2407103 (-) |
| AMCG00001401 | map4k3 | coding | downstream | 773386 | 2271897 ~ 2279797 (-) |
| AMCG00001411 | NA | coding | upstream | 53746 | 3107195 ~ 3108027 (-) |
| AMCG00001413 | mrps5,LOC102775872 | coding | upstream | 134724 | 3188173 ~ 3195828 (-) |
| AMCG00001412 | NA | coding | upstream | 215548 | 3268997 ~ 3275615 (-) |
| AMCG00001414 | NA | coding | upstream | 222795 | 3276244 ~ 3277831 (-) |
| AMCG00001417 | NA | coding | upstream | 435645 | 3489094 ~ 3490120 (-) |
| G157535 | NA | non-coding | downstream | 223002 | 2829268 ~ 2830181 (-) |
| G157534 | NA | non-coding | downstream | 236217 | 2784015 ~ 2816966 (-) |
| G157484 | NA | non-coding | downstream | 482064 | 2570870 ~ 2571119 (-) |
| G157482 | NA | non-coding | downstream | 508175 | 2544748 ~ 2545008 (-) |
| G157478 | NA | non-coding | downstream | 535207 | 2517622 ~ 2517976 (-) |
| G157549 | NA | non-coding | upstream | 17710 | 3071159 ~ 3071374 (-) |
| G157578 | LOC100846954 | non-coding | upstream | 131279 | 3184728 ~ 3185154 (-) |
| G157624 | NA | non-coding | upstream | 311172 | 3364621 ~ 3377794 (-) |
| G157633 | NA | non-coding | upstream | 340796 | 3394245 ~ 3398019 (-) |
| G157647 | NA | non-coding | upstream | 358188 | 3411637 ~ 3414248 (-) |
| AMCG00001396 | srsf7 | other | downstream | 1033319 | 2002361 ~ 2019864 (-) |
| G157339 | NA | other | downstream | 1264341 | 1750051 ~ 1788842 (-) |
| AMCG00001385 | NA | other | downstream | 2459716 | 474733 ~ 593467 (-) |
| G157593 | NA | other | upstream | 169228 | 3222677 ~ 3259955 (-) |
| G157671 | NA | other | upstream | 436318 | 3489767 ~ 3492710 (-) |
| AMCG00001416 | LOC107564242 | other | upstream | 465426 | 3518875 ~ 3521708 (-) |
| AMCG00001426 | NA | other | upstream | 820589 | 3874038 ~ 3896079 (-) |
| G158123 | NA | other | upstream | 2323981 | 5377430 ~ 5418243 (-) |
