G157535


Basic Information

Item Value
gene id G157535
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 2829268 ~ 2830181 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU198400
cccctgctgattttgtacatttgcccactgacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaataacaacacagaaatccagaaaaatacttggtggcaaaacccttgctgGCAATCaaagaggtcagacgtttcttgtagttggccaccaggtttgcacacatcttaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacgtttggcaactcgaaccttcagctccctccaccgattttctatgggattaaggtctggagactggctaggccactccaggaccttaatgtgcttcttcttgagccactcctttgacagtggggatggtgttcttggggtcattcctcctcctccaaacacggcgagttgagatgatgccaaagagcttgattttggtctcatctgaccacaacactttcacccagttctcctctgaatcattcagatgttggcaaacttcagacgggcttgtacatgtgctttcttgagtagggggaccttgcgggcgctgcaggatttcagtccttcacggcgtagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaagatcctcccgtgtagttccaggctgattcctcaccgttctcatgatcattga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198400 True 708 lncRNA 0.47 2 2829268 2830181

Neighbor

gene id symbol gene type direction distance location
AMCG00001427 LOC108269811,LOC108270202 coding downstream 17989 2810284 ~ 2811279 (-)
AMCG00001428 slc8a1 coding downstream 228041 2600826 ~ 2601227 (-)
AMCG00001405 NA coding downstream 325905 2502170 ~ 2503363 (-)
AMCG00001404 NA coding downstream 422165 2397382 ~ 2407103 (-)
AMCG00001401 map4k3 coding downstream 549471 2271897 ~ 2279797 (-)
AMCG00001411 NA coding upstream 277014 3107195 ~ 3108027 (-)
AMCG00001413 mrps5,LOC102775872 coding upstream 357992 3188173 ~ 3195828 (-)
AMCG00001412 NA coding upstream 438816 3268997 ~ 3275615 (-)
AMCG00001414 NA coding upstream 446063 3276244 ~ 3277831 (-)
AMCG00001417 NA coding upstream 658913 3489094 ~ 3490120 (-)
G157534 NA non-coding downstream 12302 2784015 ~ 2816966 (-)
G157484 NA non-coding downstream 258149 2570870 ~ 2571119 (-)
G157482 NA non-coding downstream 284260 2544748 ~ 2545008 (-)
G157478 NA non-coding downstream 311292 2517622 ~ 2517976 (-)
G157476 NA non-coding downstream 316702 2510116 ~ 2512566 (-)
G157546 NA non-coding upstream 223002 3053183 ~ 3053449 (-)
G157549 NA non-coding upstream 240978 3071159 ~ 3071374 (-)
G157578 LOC100846954 non-coding upstream 354547 3184728 ~ 3185154 (-)
G157624 NA non-coding upstream 534440 3364621 ~ 3377794 (-)
G157633 NA non-coding upstream 564064 3394245 ~ 3398019 (-)
AMCG00001396 srsf7 other downstream 809404 2002361 ~ 2019864 (-)
G157339 NA other downstream 1040426 1750051 ~ 1788842 (-)
AMCG00001385 NA other downstream 2235801 474733 ~ 593467 (-)
G157593 NA other upstream 392496 3222677 ~ 3259955 (-)
G157671 NA other upstream 659586 3489767 ~ 3492710 (-)
AMCG00001416 LOC107564242 other upstream 688694 3518875 ~ 3521708 (-)
AMCG00001426 NA other upstream 1043857 3874038 ~ 3896079 (-)
G158123 NA other upstream 2547249 5377430 ~ 5418243 (-)

Expression


Co-expression Network