AMCG00001412


Basic Information

Item Value
gene id AMCG00001412
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 3268997 ~ 3275615 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001412
TTCACTCAGAAatctaagaaaacaaacaaaaaacaccttaaCATTACAGTATTCCTTAGTTTTATCTGACAGGGTGTGTTCCTGGCAACAGTTGGGAAAGCTGGTTTTTCTGGTATTCCATTTTCTTCAAAAGGATCACCTGTTTTTCGAGCTCGCTCAGTCGAGGTGTTGCTAGCATCAAGAACGGTTTGAACAGATGGCAGCAGCTACAGCACAGCCCATGGGTAGTTTGCCCAGTGGAGTCAGTGTATGCACAACTCTACCTGACATCTTCTATTTACCAGAACTGATCTTTGGTGGCCTTGTATGGATCCTGATTGCATCTACCAAAGTTTTTCCACCAAATCCTCTAGGATGGGtgatgtttgtgtctgtgttctgTTTTGTCATGACATTTCTCTGGCTGGTGCTCTTCATTTGTGGAGTGCACCAAAATAGCCCAGGTTGGGCTGCAGCTGATTGGGCATACCATGTAATTGCAGCTTTCTTTTACTTGAGTGCTGCAGTACTATTGGCCTTCATAACACTTGTCAACAAGAACATTGATTTGAAGATCTACCAAGAGGATATTTCTGCAGTAGTGTTTGCATATATAGCAACGCTGCTGtattttgtccatgccattctTTCTGCAGTAAGATGGAAATCCTTTTGAAGataaagaagcaaaacaaatgatGGCAAAGTCTGTTGAAAGTATTTTACTGATTGGGGAAAACACTGCTCTTTTCTTACTCAATAACAATGGGCATTTTGCACAtagtacagtgttaatttaGTCAGCATTTGCTGTATTTTAGTCTCAGTCTTTCTCATGTTTTCAGCTTTGTCTGATGTAAAACACCATGAAAACCTCCACTGCATAAACATAGAAAAAAGAAGTCACATCTCCTTAgtaggaaaaacaaattatattttgtcaacTAAACTAAAATGGCAACTTAAAAAGTATTCTTGGGACTCAGGACTAAAACATCTACAGGTTTCAGAAGGTAAGACATAGAGAATAACTCCCTTAGAATTAAACAGATGTTCCCACAGAATATTCATGAACTAGAATGAGACTTGACTCTTAACAAACAAATGCAGACTAAATTAACACTGGCTTAATGGATTGCACAGCCCACTCATTCGTATTTGATGGTCAAAGTAATAAAAAGattcaataaattaatcaaaatatattgcttcaggatacaattattttagatttagaataacataattttatctGTTCCATATAAATGCCGAACATTTTGCAGAACCTTAtgtatcattaaaaaatgaCTGTACATTTatcatcatgtttattctttttgTAAAGACGTATGTCATATCAAGTCATGTATAAGGCACAGAAATTAGGCAAGCCAACTTTACTATTCTTCATTTTCATACATACCTTCTTTATTATCAATgggaaatatgttttatatttttgaactATTGCACAAAATTggtgttaattttttttattgtaatgttttcttaaagGGGGCTATACTTGCTGTAAAGCTTAAACTTTCCTCAGTTCCTGACTACTACACTATACTGTCTTATTCTTCCTGgtctatataatattatatatagtatatatatatacctgtcTGGTGTTGcaatagtatagtatatatatatatagtatatgctttgtatgtctgtgtttaaaaagggatatttcattaataaaatgacaaaataaaaagc

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001412 True 1707 mRNA 0.35 4 3268997 3275615

Neighbor

gene id symbol gene type direction distance location
AMCG00001413 mrps5,LOC102775872 coding downstream 73169 3188173 ~ 3195828 (-)
AMCG00001411 NA coding downstream 160970 3107195 ~ 3108027 (-)
AMCG00001427 LOC108269811,LOC108270202 coding downstream 457718 2810284 ~ 2811279 (-)
AMCG00001428 slc8a1 coding downstream 667770 2600826 ~ 2601227 (-)
AMCG00001405 NA coding downstream 765634 2502170 ~ 2503363 (-)
AMCG00001414 NA coding upstream 629 3276244 ~ 3277831 (-)
AMCG00001417 NA coding upstream 213479 3489094 ~ 3490120 (-)
AMCG00001419 NA coding upstream 216379 3491994 ~ 3507833 (-)
AMCG00001418 NA coding upstream 232261 3507876 ~ 3508551 (-)
AMCG00001423 gpr137b,LOC105902257,LOC102792340,LOC104924458 coding upstream 313575 3589190 ~ 3599457 (-)
G157578 LOC100846954 non-coding downstream 83843 3184728 ~ 3185154 (-)
G157549 NA non-coding downstream 197623 3071159 ~ 3071374 (-)
G157546 NA non-coding downstream 215548 3053183 ~ 3053449 (-)
G157535 NA non-coding downstream 438816 2829268 ~ 2830181 (-)
G157534 NA non-coding downstream 452031 2784015 ~ 2816966 (-)
G157624 NA non-coding upstream 89006 3364621 ~ 3377794 (-)
G157633 NA non-coding upstream 118630 3394245 ~ 3398019 (-)
G157647 NA non-coding upstream 136022 3411637 ~ 3414248 (-)
G157646 NA non-coding upstream 160730 3436345 ~ 3442353 (-)
G157664 NA non-coding upstream 200009 3475624 ~ 3477594 (-)
G157593 NA other downstream 9042 3222677 ~ 3259955 (-)
AMCG00001396 srsf7 other downstream 1249133 2002361 ~ 2019864 (-)
G157339 NA other downstream 1480155 1750051 ~ 1788842 (-)
AMCG00001385 NA other downstream 2675530 474733 ~ 593467 (-)
G157671 NA other upstream 214152 3489767 ~ 3492710 (-)
AMCG00001416 LOC107564242 other upstream 243260 3518875 ~ 3521708 (-)
AMCG00001426 NA other upstream 598423 3874038 ~ 3896079 (-)
G158123 NA other upstream 2101815 5377430 ~ 5418243 (-)
AMCG00001483 NA other upstream 2166012 5441627 ~ 5443581 (-)

Expression


Co-expression Network