Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00001397 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 1656248 ~ 1710333 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00001397 | True | 651 | mRNA | 0.54 | 6 | 1656248 | 1710333 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001387 | mrpl2,LOC106590008 | coding | downstream | 101185 | 1537602 ~ 1555063 (-) |
| AMCG00001386 | LOC108240633,LOC103371311,LOC101470936 | coding | downstream | 609513 | 1045785 ~ 1046735 (-) |
| AMCG00001381 | NA | coding | downstream | 983023 | 605904 ~ 673225 (-) |
| AMCG00001379 | NA | coding | downstream | 1181835 | 464586 ~ 474413 (-) |
| AMCG00001382 | sipa1l2,LOC107666899,LOC107719700,LOC107667119,LOC107728329 | coding | downstream | 1203114 | 448771 ~ 453134 (-) |
| AMCG00001398 | NA | coding | upstream | 156995 | 1867328 ~ 1868100 (-) |
| AMCG00001408 | dhx57,LOC106577153,LOC107081174,LOC107589582 | coding | upstream | 311626 | 2021959 ~ 2045438 (-) |
| AMCG00001409 | sos1,LOC106564790 | coding | upstream | 400083 | 2110416 ~ 2167344 (-) |
| AMCG00001402 | LOC106608247 | coding | upstream | 510834 | 2221167 ~ 2251759 (-) |
| AMCG00001401 | map4k3 | coding | upstream | 561564 | 2271897 ~ 2279797 (-) |
| G157270 | NA | non-coding | downstream | 303022 | 1352997 ~ 1353226 (-) |
| G157257 | NA | non-coding | downstream | 551776 | 1101908 ~ 1104472 (-) |
| G157252 | NA | non-coding | downstream | 611392 | 1044382 ~ 1044856 (-) |
| G157250 | LOC100846954 | non-coding | downstream | 669208 | 986322 ~ 987040 (-) |
| G157245 | NA | non-coding | downstream | 716758 | 939239 ~ 939490 (-) |
| G157329 | NA | non-coding | upstream | 38213 | 1748546 ~ 1748862 (-) |
| G157353 | NA | non-coding | upstream | 113864 | 1824197 ~ 1825624 (-) |
| G157358 | NA | non-coding | upstream | 142680 | 1853013 ~ 1853289 (-) |
| G157362 | NA | non-coding | upstream | 197226 | 1907559 ~ 1907763 (-) |
| G157463 | NA | non-coding | upstream | 709195 | 2419528 ~ 2419741 (-) |
| AMCG00001385 | NA | other | downstream | 1062781 | 474733 ~ 593467 (-) |
| G157339 | NA | other | upstream | 39718 | 1750051 ~ 1788842 (-) |
| AMCG00001396 | srsf7 | other | upstream | 292028 | 2002361 ~ 2019864 (-) |
| G157593 | NA | other | upstream | 1512344 | 3222677 ~ 3259955 (-) |
| G157671 | NA | other | upstream | 1779434 | 3489767 ~ 3492710 (-) |
| AMCG00001416 | LOC107564242 | other | upstream | 1808542 | 3518875 ~ 3521708 (-) |
