AMCG00001456


Basic Information

Item Value
gene id AMCG00001456
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 4722818 ~ 4730768 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001456
tatttgtttgattaaatctgTCTTGGCAAACCTGTACTTCCCACTGATAAGGCATGTAGAAATGTGCAGAACTCATCACCCTAATGCAATAATCATGTCCCCACAACTGTCTGAACCCTTACAGACTGAAGAGGGTTTAATACTTATGGCACCACTGAAtgactgtttttaatttcagatccCCTGTATGCCAGCAGTTTGTTTGCTACAACACTCAAGGCATCCCCTGGGGAGGCGTTTGAACAGATCGCCATTGATGTGCAACCTTCTACACCTGCATCCCCACAGTCCCTTAAGAAAACAGCAAGACGTCACTGGGACCTTTACAATCATCAACGCACCCAAATGTTTATAAACATCCTGCAGGACTTCCAGCTGTGTGGACATGACACCACAGTGGAGAAGCTAAAGAAGAAATGGAACAATCTCCTTGTGACATACAAGAGGGCAAAGGACAGAATCAGGGAGTCTGGACAGACCCAGATTACATGGGTGTTCTTTGAGGCAATGGATAGTCTGCTCAGCAAGGCACAGGGGGCTTTACCCGCAAAAGACACCATTATGACAACAAACCTGTTCCCTGATGCGTCTGTGCCACAATGTGCCCCTTCAACGGTCTCTTCCCAACCACTGCCATCAATGTCAGGACTGACTGTGTCTACTGCCATTGAGACGCCAGCCTCCCTCCCACAACACAtcccagaaaaaagaaaagcaaagacaCCTGGTGTAAATACAGCTGGGGAGTTTCTGACTGAAGAGGCAGATCAGTCTGCAAAAAGAACCAAGATGCTGGAAACCTTCATAGAAACCAATGAATGGCTACAGCAAAAGAGGGAAGAAAGCTGCCGGAAAGCCGGGCAGAGGGACAGGAGGAGAGAACcacccCCTGAGTTACCCGTTAACCCCCCCTTGTCAGCCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001456 True 924 mRNA 0.48 5 4722818 4730768

Neighbor

gene id symbol gene type direction distance location
AMCG00001458 NA coding downstream 101669 4594336 ~ 4621149 (-)
AMCG00001455 mark1,LOC108411950,LOC106585018 coding downstream 171634 4522509 ~ 4551184 (-)
AMCG00001454 NA coding downstream 206511 4515384 ~ 4516307 (-)
AMCG00001443 LOC108411957,LOC107753489,LOC108270513,LOC105026838,LOC106564801,LOC103369331 coding downstream 238539 4471081 ~ 4484279 (-)
AMCG00001444 LOC106577203 coding downstream 285973 4415513 ~ 4436845 (-)
AMCG00001465 LOC108260727,LOC105890925,LOC108260508,LOC106577117 coding upstream 120464 4851232 ~ 4857063 (-)
AMCG00001464 rps27a,LOC100194654,LOC107579955 coding upstream 141988 4872756 ~ 4875185 (-)
AMCG00001466 eml6,LOC106577113 coding upstream 212821 4943589 ~ 4955143 (-)
AMCG00001467 eml6,LOC106608004 coding upstream 236839 4967607 ~ 4997395 (-)
AMCG00001468 LOC106608004 coding upstream 280176 5010944 ~ 5015498 (-)
G157970 NA non-coding downstream 70812 4651338 ~ 4652006 (-)
G157911 NA non-coding downstream 452958 4263926 ~ 4269860 (-)
G157850 NA non-coding downstream 569370 4095235 ~ 4153448 (-)
G157789 NA non-coding downstream 805732 3881840 ~ 3917086 (-)
G158017 rtn4 non-coding upstream 184021 4914789 ~ 4934873 (-)
G158222 NA non-coding upstream 1096728 5827496 ~ 5827789 (-)
G158238 NA non-coding upstream 1173782 5904550 ~ 5909009 (-)
G158245 NA non-coding upstream 1187032 5917800 ~ 5919711 (-)
G158247 NA non-coding upstream 1189948 5920716 ~ 5921922 (-)
AMCG00001426 NA other downstream 826739 3874038 ~ 3896079 (-)
AMCG00001416 LOC107564242 other downstream 1201110 3518875 ~ 3521708 (-)
G157671 NA other downstream 1230108 3489767 ~ 3492710 (-)
G157593 NA other downstream 1462863 3222677 ~ 3259955 (-)
AMCG00001396 srsf7 other downstream 2702954 2002361 ~ 2019864 (-)
G158123 NA other upstream 646662 5377430 ~ 5418243 (-)
AMCG00001483 NA other upstream 710859 5441627 ~ 5443581 (-)
G158207 NA other upstream 864616 5595384 ~ 5597839 (-)
AMCG00001487 NA other upstream 927194 5657962 ~ 5746325 (-)
AMCG00001491 NA other upstream 1149416 5880184 ~ 5882320 (-)

Expression


Co-expression Network