AMCG00002457


Basic Information

Item Value
gene id AMCG00002457
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 15389216 ~ 15405384 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002457
ATGGACTATTTTTACCAGCAAGTCTTACAGAAAGACGTGACCCGACGGCTGCAGGTTGGCCAGGAGCTGATTGACTACCTCAGTGACCCGCAGAGGTCCGCGGATGTGGAGCAGGACAAATCTCGCCTGGATAAGACTATAGACGAGTTAACGGGGTGGGTGAACTCCAGTAATTACAAGGTGGCATTGATGGGTTTAGATATTGTTAGTGCATTCGTAGACAGACTGTCAGAACGCTTCAAAGGTTACTTGGGAACTGTTGTTCCTGCCCTGGTAGACAGATTAGGCGATTCCAAAGACCAAGTTCGCGAGCAGTCGCAGAACCTCATTCTCAAGCTGATGGACCAGGCTGCTCCTGTGATGGTGAGTGCTATGGGGCGTCCTGTGAGAGCTGAACTGGATATGTGTGGGGCAGGGCCTGCTGGTGCTGAGCACTGGCTGCTCAGACACTCTGTCTATGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002457 True 465 mRNA 0.52 3 15389216 15405384

Neighbor

gene id symbol gene type direction distance location
AMCG00002456 NA coding upstream 10540 15373006 ~ 15378676 (+)
AMCG00002449 NA coding upstream 426845 14951038 ~ 14962371 (+)
AMCG00002450 NA coding upstream 442693 14922422 ~ 14946523 (+)
AMCG00002451 NA coding upstream 477900 14878149 ~ 14911316 (+)
AMCG00002443 NA coding upstream 702246 14686068 ~ 14686970 (+)
AMCG00002458 clasp2 coding downstream 29526 15434910 ~ 15483656 (+)
AMCG00002459 ubp1,LOC107706185 coding downstream 79087 15484471 ~ 15505734 (+)
AMCG00002461 NA coding downstream 174348 15579732 ~ 15606498 (+)
AMCG00002462 NA coding downstream 211996 15617380 ~ 15623746 (+)
AMCG00002465 bbs9 coding downstream 238345 15643729 ~ 15655534 (+)
G123295 NA non-coding upstream 49047 15262949 ~ 15340169 (+)
G123197 NA non-coding upstream 696440 14691981 ~ 14692776 (+)
G123171 NA non-coding upstream 1019303 14369093 ~ 14369913 (+)
G123169 NA non-coding upstream 1022881 14365036 ~ 14366335 (+)
G123043 NA non-coding upstream 1798535 13572519 ~ 13590681 (+)
G123386 NA non-coding downstream 284217 15689601 ~ 15689963 (+)
G123388 NA non-coding downstream 389024 15794408 ~ 15795149 (+)
G123468 NA non-coding downstream 1080442 16485826 ~ 16489952 (+)
G123525 NA non-coding downstream 1246158 16651542 ~ 16651964 (+)
G123526 NA non-coding downstream 1248115 16653499 ~ 16654884 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 1027680 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 2259519 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 2318384 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 2337245 13031759 ~ 13051971 (+)
G122746 NA other upstream 3248751 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 1552777 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 1570904 16976288 ~ 16985906 (+)
G123807 NA other downstream 2510052 17915436 ~ 17984730 (+)
G123989 NA other downstream 3426630 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 3668309 19073693 ~ 19127947 (+)

Expression


Co-expression Network