G123807


Basic Information

Item Value
gene id G123807
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 17915436 ~ 17984730 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU155222
AAAGGTTCCTAACTTTGTAGCCTAGGTGCAAGATCAGATTTGCAAATGAATGCATATGGTGTCTTCTTGTATTTGACACTGTTTTAGCGTGGCTGTCTCGCCTCTTAAAGAAGGTACATTAGATTTGAAAGGATATTGGAACACTTGCACTGATCAGTTTTTATTGCAGGTGAACATTTTCTGCCAGCtcagtgtttttatgtattggaTCATTCTGTCTATAACTGTTATACTAAAGACGTTCTTCCACAGAAATAAACCTTTTCCTGCTGCATCCCTGACAGCACCTCATACCTGTAGCCAACCCGGGTGATGCCCATTCCCATCTTAAGGAGTTGATCTACATCGATTCTGACCTTGTTGTGACTCCGATCATTGACAATCCTAAGATATTGAAACCTGCTCCTGTGAGATTTGATCCTAAAACATTGAGTGTCAATGCCTTTCCAGCTGAGAAACTGGCATCTCTGAACGATCAGGCATGGGACAGCTTTGTGCAGCAACTGTGCTCCTCACTGGGTCAGAGTGATAAGATGACTGGAGCTCCCAGGACAAAGCTGAACCTACTGTGCTATCTTTGCTCCGTGTCAGGCCATAAGGAAGCAGCCACAAGGTTAATCAACTCACAGCTGTTCCTGTCATTAACCCATGTGTTGCGCACAGCTCCTAACTGGGATGTGCGTGCCAAGGTGATTCGAGTGATTGGGTTACTGTCCTCTCATGCTGTAGAGCTGAATGAAGACGTGCCTGTTACAGAAGCGCTCTGCAGAATCACACGGCACTCCGCCAGCGCCTTCCACAGCATGATTGACCAGGTGGGCTTGCCCGCCATCCTCAACAGCCTGGTGTGCGGAATAAGCCGCGTTCAGCAGCACATGCTCACCATGTTCTCCGCAGTGCTGGCGTCTGGGGTCCACTTGCAGTTAATTGGCCATTAACTGTGATGCAGGATTTTCTCCCCCAGCTGCAGTTAAATAATTATCCTGGCATTTCAACATCTGTCTTAGGTGACGAGCAGTGTTGGATTATATGTCTTTTCTCTGCAGACAGTGGGGAAATCATACAAGTGTAAAGATTCTGAAaagctataaaaaaatatttgggcGGGGCTTAAGGGTTTATTTTTTGCCTTCTGTGTTTCTCCAACATTTTCCTTGAATTGGTTTTTTTACAGACATTGTAGCACttgcaattaatattttatatctgTATCTTATATTGTATatcaagatttgttttaaatccattttgattgctatttctgtctctctttctctacctCACTCTGTTTGGAATAAGGCCTTAACTTGTTCTTtgtataaaagtaaaaaaagaaagaaaatgcaataattaagGATTAAGAAGTAAAGTTGGTTCCACTggagcagaaataaaatagaaaatctaCTGAGTTGAATATGAATGCATAGAATAAGAGTACCTGAGCACCACTGAGTGCATATTGTCCGTTTGTATTATTCTGATAGAAACACAATCTTCAAATGTCAAAGTGCACTGTGCTTGAGAACTAACATGTTTGAcattgttgtttatctgtgcctTGCTAAATAGAAGTCTTATAAACTATGTGTTTATTCATGCATTGTCTtgcataatattataataatttaaatgaatctgTAAGTAACTAAACTAATTGGGTAAGGAACTACAGTGAACTTGGGAGGAAAGCTCACAACACTGTTGATGTAATTACAGTTTATGCAAGAAGTGGATGCTTTTGAAAGTAATTAACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155222 True 1759 TUCP 0.41 6 17915436 17984730

Neighbor

gene id symbol gene type direction distance location
AMCG00002527 ctnnb1,LOC107570993,LOC107701997,LOC107748497 coding upstream 103709 17806735 ~ 17811727 (+)
AMCG00002525 NA coding upstream 240326 17661879 ~ 17675110 (+)
AMCG00002526 dync1li1,LOC107654754,LOC107706262,LOC107591989,LOC107688360,LOC107710339 coding upstream 254263 17652475 ~ 17661173 (+)
AMCG00002529 NA coding upstream 444144 17445920 ~ 17471292 (+)
AMCG00002528 atp2c1,LOC107592020,LOC107668304,LOC103369286 coding upstream 499540 17389945 ~ 17415896 (+)
AMCG00002535 LOC107751889,LOC107704104 coding downstream 13316 17998046 ~ 18050916 (+)
AMCG00002534 cnot10 coding downstream 160482 18145212 ~ 18161564 (+)
AMCG00002540 LOC106606077 coding downstream 353026 18337756 ~ 18346198 (+)
AMCG00002546 pomgnt2,LOC106605419,LOC106579937 coding downstream 472321 18457051 ~ 18458790 (+)
AMCG00002553 NA coding downstream 815130 18799860 ~ 18810379 (+)
G123797 NA non-coding upstream 155241 17695860 ~ 17760195 (+)
G123653 NA non-coding upstream 767100 17091975 ~ 17148336 (+)
G123659 NA non-coding upstream 774001 17137413 ~ 17141435 (+)
G123568 NA non-coding upstream 1122637 16792100 ~ 16792799 (+)
G123526 NA non-coding upstream 1260552 16653499 ~ 16654884 (+)
G123833 NA non-coding downstream 66282 18051012 ~ 18052338 (+)
G123916 NA non-coding downstream 520158 18504888 ~ 18509774 (+)
G123943 NA non-coding downstream 569755 18554485 ~ 18556562 (+)
G123950 NA non-coding downstream 599439 18584169 ~ 18586027 (+)
G123993 NA non-coding downstream 859638 18844368 ~ 18861644 (+)
AMCG00002496 NA other upstream 929530 16976288 ~ 16985906 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other upstream 955354 16958161 ~ 16960082 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 3553900 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 4785739 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 4844604 13044693 ~ 13070832 (+)
G123989 NA other downstream 847284 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 1088963 19073693 ~ 19127947 (+)
AMCG00002561 NA other downstream 1145337 19130067 ~ 19133567 (+)
AMCG00002573 NA other downstream 2257118 20241848 ~ 20333030 (+)
AMCG00002622 NA other downstream 5002815 22987545 ~ 22990164 (+)

Expression


Co-expression Network