G123169


Basic Information

Item Value
gene id G123169
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 14365036 ~ 14366335 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154427
TTtctttttataacattttattgctTCACATTGAAATTAATCTTGTTTTGTCCTCGTTTGTCTGCCATAGCGCAATAATTACTGACTAAAAGATGAAGACAGGGAAGTATGAAAATCTAATTGTAGTTTATAAGGTGGGTAATAATTGTGGCATACTTGCTAAAAATAACCTTTAATGGCAATGcactttgaataaaaataatcatcaggACAGGATTCAGAGAAGCAATCGGTCACGTAGAAACTGACTTGTTATATAAACAATTATACTATATTCACAAAATCATATCTTCTCAGCTAAACTTCCTCAAAAAGCATTTATCAGGACAAAATACTTGAAAATAGTCAAACATCTtcacaaaaaactgttttaatgtcATATTGACAGGAGTCTTCTACACATGATGAATGGATAAACCGGGTTTTAAGGAACGTTAGGAAAAGCACGGCCTACTAACAGTCACTCGTAGAAAATACAAGGTATGTATGATGACGGTTTTATTCCACACTTGTCTGCATCTCGGAGAATCGGCTGAAATGGCGATAAAGGGCAGCGCCGGCCCTCTGCGCTGTCACTCTGCGGTTGCTTTTCACAGAGTGGCGATGGGGACTCGGCCTGGTGAGCACCGATCGCTACACAAGAGCCCCTTTTGCTCTCCAGTCCCCTGACAACAGGTCCATGagttcctcctcctcttcctcgctgTTCATCTCCTCGGTGCTGTGCTCCGGCTCCGTATCCATCTTCCTCCTCAGCTCCTCCTTTATGATGTCCTGTTTGTCTCTCAGCTGCTCAACTCGCCGGTAGCACTCTCTGAAAATCCGGAACGCAAGACATTGGATGGCAGGACCATGTGAAGgCCCTACAATGTGCCGTTTACTCACATTTGCTCATCAATCTCCCCAATTTGCCGGTCTAAGCGCCCCTCCTCGTCGTCCTCTGCTACGATGGCTTCTGAAGCctaaagagaagaaacaaaaaacatgggATGCATTTCATTCACAAGCATCAATTTAATATCCAGAAAGCACAACAAAGTGCCTACAAACGTTCACCATTACATGCTATAACATCACCGAGGCATGTGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154427 True 1092 lncRNA 0.43 2 14365036 14366335

Neighbor

gene id symbol gene type direction distance location
AMCG00002429 ino80c,LOC107706244 coding upstream 487239 13867114 ~ 13877797 (+)
AMCG00002424 tmem245,LOC103353896 coding upstream 646575 13700250 ~ 13718461 (+)
AMCG00002423 frrs1l coding upstream 668434 13691020 ~ 13696602 (+)
AMCG00002422 NA coding upstream 708478 13655239 ~ 13656558 (+)
AMCG00002418 erp44,LOC107593692,LOC107723539 coding upstream 853753 13490178 ~ 13511283 (+)
AMCG00002440 NA coding downstream 32852 14399187 ~ 14459606 (+)
AMCG00002439 NA coding downstream 200064 14566399 ~ 14576984 (+)
AMCG00002442 NA coding downstream 239329 14605664 ~ 14614093 (+)
AMCG00002444 NA coding downstream 272541 14638876 ~ 14641950 (+)
AMCG00002441 ikzf1 coding downstream 289518 14655853 ~ 14666224 (+)
G123043 NA non-coding upstream 774355 13572519 ~ 13590681 (+)
G123041 NA non-coding upstream 794225 13566414 ~ 13570811 (+)
G123039 NA non-coding upstream 818736 13546064 ~ 13546300 (+)
G122929 NA non-coding upstream 1059437 13304697 ~ 13305599 (+)
G122914 NA non-coding upstream 1175174 13189282 ~ 13189862 (+)
G123171 NA non-coding downstream 2758 14369093 ~ 14369913 (+)
G123197 NA non-coding downstream 325646 14691981 ~ 14692776 (+)
G123295 NA non-coding downstream 896614 15262949 ~ 15340169 (+)
G123386 NA non-coding downstream 1323266 15689601 ~ 15689963 (+)
G123388 NA non-coding downstream 1428073 15794408 ~ 15795149 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 3500 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 1235339 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 1294204 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 1313065 13031759 ~ 13051971 (+)
G122746 NA other upstream 2224571 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 2591826 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 2609953 16976288 ~ 16985906 (+)
G123807 NA other downstream 3549101 17915436 ~ 17984730 (+)
G123989 NA other downstream 4465679 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 4707358 19073693 ~ 19127947 (+)

Expression


Co-expression Network