Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002439 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 14566399 ~ 14576984 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K24521 | VWC2; brorin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002439 | True | 852 | mRNA | 0.57 | 2 | 14566399 | 14576984 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002440 | NA | coding | upstream | 106793 | 14399187 ~ 14459606 (+) |
| AMCG00002429 | ino80c,LOC107706244 | coding | upstream | 688602 | 13867114 ~ 13877797 (+) |
| AMCG00002424 | tmem245,LOC103353896 | coding | upstream | 847938 | 13700250 ~ 13718461 (+) |
| AMCG00002423 | frrs1l | coding | upstream | 869797 | 13691020 ~ 13696602 (+) |
| AMCG00002422 | NA | coding | upstream | 909841 | 13655239 ~ 13656558 (+) |
| AMCG00002442 | NA | coding | downstream | 28680 | 14605664 ~ 14614093 (+) |
| AMCG00002444 | NA | coding | downstream | 61892 | 14638876 ~ 14641950 (+) |
| AMCG00002441 | ikzf1 | coding | downstream | 78869 | 14655853 ~ 14666224 (+) |
| AMCG00002443 | NA | coding | downstream | 109084 | 14686068 ~ 14686970 (+) |
| AMCG00002451 | NA | coding | downstream | 301165 | 14878149 ~ 14911316 (+) |
| G123171 | NA | non-coding | upstream | 196486 | 14369093 ~ 14369913 (+) |
| G123169 | NA | non-coding | upstream | 200064 | 14365036 ~ 14366335 (+) |
| G123043 | NA | non-coding | upstream | 975718 | 13572519 ~ 13590681 (+) |
| G123041 | NA | non-coding | upstream | 995588 | 13566414 ~ 13570811 (+) |
| G123039 | NA | non-coding | upstream | 1020099 | 13546064 ~ 13546300 (+) |
| G123197 | NA | non-coding | downstream | 114997 | 14691981 ~ 14692776 (+) |
| G123295 | NA | non-coding | downstream | 685965 | 15262949 ~ 15340169 (+) |
| G123386 | NA | non-coding | downstream | 1112617 | 15689601 ~ 15689963 (+) |
| G123388 | NA | non-coding | downstream | 1217424 | 15794408 ~ 15795149 (+) |
| G123468 | NA | non-coding | downstream | 1908842 | 16485826 ~ 16489952 (+) |
| AMCG00002437 | pcbp3,LOC108266078,LOC107657516,LOC107728912 | other | upstream | 204863 | 14327632 ~ 14361536 (+) |
| AMCG00002393 | NA | other | upstream | 1436702 | 13125378 ~ 13129697 (+) |
| AMCG00002388 | NA | other | upstream | 1495567 | 13044693 ~ 13070832 (+) |
| AMCG00002390 | NA | other | upstream | 1514428 | 13031759 ~ 13051971 (+) |
| G122746 | NA | other | upstream | 2425934 | 12133786 ~ 12140465 (+) |
| AMCG00002500 | snrpd1,LOC105910057,LOC107655105,LOC107559756 | other | downstream | 2381177 | 16958161 ~ 16960082 (+) |
| AMCG00002496 | NA | other | downstream | 2399304 | 16976288 ~ 16985906 (+) |
| G123807 | NA | other | downstream | 3338452 | 17915436 ~ 17984730 (+) |
| G123989 | NA | other | downstream | 4255030 | 18832014 ~ 18838531 (+) |
| AMCG00002562 | LOC106579813 | other | downstream | 4496709 | 19073693 ~ 19127947 (+) |
