AMCG00002642


Basic Information

Item Value
gene id AMCG00002642
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24369884 ~ 24376014 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002642
TCATTCCTTTAGTTTCATTGGGACGGATGTCGTTGGAATCGTGTATACAAATGATGCAATCCTTTCTCCAATCGGAAAGCTTTCCCAAAGGTCGTAGGCTAGAGGTTGTTTCGTTGCTGTACACGCCTTTGCTGCGCAACCTGCGCTGATCGAAAGCTGGGTAATGATGGCTTCTACCGACTGTTTACGTGTGTAAATGACCATTAGCAGTCTGGGGCAGATGTGTGAATATGTGTATGTACTTCTGTTGATTTTCTATACTTAAATATGAGCCCTGCTACTGGAGAAGGTGCTGCAGCGTTACCTGGCGCAGCGACGTCTCCATCCGCGTCGCTGCCAGCCAAGGCAGACCTGCGCCGGCTCTTCAGTCACGTCAAATACGAGAACCTGGTGGCTGGACTGAGCGGAGGGGTGGTGTCCACCCTGGTGCTTCACCCTCTGGACCTTGTCAAAATCAGGTTCGCAGTGAGCGATGGATTGGATTTGAGGCCTAAGTACAGTGGAATATTACACTGTATGAAAAGTGTCTGGAGTCAAGAGGGACTTCGGGGGCTTTACAAAGGAGTGACACCCAATGTGTGGGGTGCTGGAGCGTCCTGGGGGCTGTATTTCTGCTTctaCAATGCACTCAAGAGCTACAAGCAGGAAGGCAATCAGTCTGAACTGACCGCTACGCAGCATTTGGTCTCTGCTGCCCAGGCAGGGGCTTTGACGCTTTGCCTAACAAACCCAATCTGGGTCACAAAGACTCGCCTGGTCCTGCAGTATGACTCTGCAAGTGAACCATCCAAAAAGCAGTATAAGGGCATGGTTGATGCTCTCGTAAAAATCTATCGCTATGAGGGTATACCGGGATTGTACAGGggTTTTATCCCTGGCTTGTTTGGCACATCACATGGGGCTATACAGTTCATGGCATATGAGGAACTTAAGCGGGCCTATAACAGAAACAGGAACAAGCCATCCCAAGCACAGTTGAATCCACTGGAATATATTACAATGGCTGCTATATCGAAAATGTTGGCAGTGTCTGCAACGTATCCATATCAGGTGATCCGCGCTCGGCTGCAGGACCAGCACAATCACTACGCAGGAGTCACCGATGTCATCAGGAGGACATGGAGAAATGAAGGTGTCCATGGATTCTACAAGGGAATTGTACCCAATGTGATCAGGGTGACCCCGGCGTGCTGCCTTACGTTTGTCGTGTACGAACATGTGTCCCGTTTCTTGCTCAATTTACGCAGCTGAACTCCACATGCTATCCTGGTACCTATCATCTCCAGGTGCACAACACCAGAGCATAAAAACCTTGGGAACAATTTACAGACATGACCTGGAGGGTCGATTTACCTGTCTAATGTCGAGAGCAAATCTTCTTTTGTAAGGCATTAAATGCAGTGACAATTGACAAAGGAAGGAAGACAAAttgtaaaaagttttttttgaGCAGGGATAGCCGCAAAAGGCACAGGTGTACATAAGATTGAATGtcttttagtgtttttatgaAAGGTGGATTGATGTAGTttcatgtgcatgtgtgtgaaggCGATGGTGTTAAATTCATGCTTAATTTGCTCCATTAGGAAAGGACTGCTATCATAATGCAAACACTCAACCAACAGGTGGGATTCAGCTCCTGTGAGTagagtgaaataaaatgacCATCGCTTGTTTTACTTTATGGTAATCTGtgagattacatttatttatttatttattttaatgttgaagACTTTGTAGTTGAAAATTGTGAAGTTCAGCTTTTCCCTGGTAAATAATAAGGCGAatgatttttgcattttgaagtTGATCTTCATGTTTCTGGTGCCAAGtgctttgtgaaatgtttctgGGGCAGTTTCAGTGTGGACCACCGCCCCGCTTCATCAGCAGTGCTTGGAGGTTCTGTGATGCTTTAAAAAAGCACCCCTGTACAGGACAGATAGGATAACTGCATATGgcctggaaaataaatactctgGAAAGTTCTTTGCACTAATCTGTGCAGAACTTGGCACTTCCTGATCTGCATTTTCCTgtctattatatataaattcaaaCCATTTTATGATGACAACTAACTCGTCCACCCTTCAGTCCACATCACCTGCAACTTTTCACACATGTTCATGCAATCAATCTATTGTCATTTTACTCCCATGAGGCATCttatattaaaaagacaagTCTTGTGTATGGAAATACACTAGCTAAACTAGAcaagttttaatatttaaaatgggaCTAATCATCATTAACTTCTCATCATTTCCAtctgagttttttttaacaaaccaggtttttaaaatcatatacagtgaggggaaaaaagtatttgatcctctgctgattttgtacgtttgcccactgacaaagaaatgatcagtctataatttgaatggtaggtgtattttaacagtgagagacagaataacaacgaaaaaa

Function

GO: NA

KEGG:

id description
K15115 SLC25A32, MFT; solute carrier family 25 (mitochondrial folate transporter), member 32

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002642 True 2451 mRNA 0.43 7 24369884 24376014

Neighbor

gene id symbol gene type direction distance location
AMCG00002636 dpys,LOC107686378 coding upstream 333353 24019504 ~ 24036531 (+)
AMCG00002637 dpys coding upstream 362173 23997247 ~ 24007711 (+)
AMCG00002635 lrp12,LOC107754924,LOC107714470,LOC107689529 coding upstream 384498 23967578 ~ 23985386 (+)
AMCG00002631 NA coding upstream 692447 23652972 ~ 23677437 (+)
AMCG00002630 NA coding upstream 961918 23407566 ~ 23407966 (+)
AMCG00002646 NA coding downstream 130279 24506293 ~ 24517840 (+)
AMCG00002649 NA coding downstream 301292 24677306 ~ 24679989 (+)
AMCG00002657 NA coding downstream 562852 24938866 ~ 24949499 (+)
AMCG00002656 LOC107596739 coding downstream 590973 24966987 ~ 24978576 (+)
AMCG00002659 NA coding downstream 753602 25129616 ~ 25134264 (+)
G124831 NA non-coding upstream 91244 24278434 ~ 24278640 (+)
G124823 NA non-coding upstream 108043 24261548 ~ 24261841 (+)
G124783 NA non-coding upstream 365523 23987702 ~ 24004361 (+)
G124774 NA non-coding upstream 539900 23829670 ~ 23829984 (+)
G124770 zfpm2 non-coding upstream 687658 23682013 ~ 23682226 (+)
G124856 NA non-coding downstream 11895 24387909 ~ 24392351 (+)
G124860 NA non-coding downstream 28462 24404476 ~ 24406978 (+)
G124862 NA non-coding downstream 35000 24411014 ~ 24411341 (+)
G124908 NA non-coding downstream 203328 24579342 ~ 24581696 (+)
G124910 NA non-coding downstream 231282 24607296 ~ 24607534 (+)
G124769 NA other upstream 688499 23677935 ~ 23681385 (+)
G124689 NA other upstream 1079349 23152648 ~ 23290535 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other upstream 1189841 23068124 ~ 23180043 (+)
AMCG00002622 NA other upstream 1379720 22987545 ~ 22990164 (+)
AMCG00002573 NA other upstream 4036854 20241848 ~ 20333030 (+)
G124863 NA other downstream 46238 24422252 ~ 24422613 (+)
AMCG00002650 NA other downstream 385870 24761884 ~ 24776815 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other downstream 998928 25374942 ~ 25384312 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other downstream 1899300 26275314 ~ 26279137 (+)
G125219 NA other downstream 1986198 26362212 ~ 26369525 (+)

Expression


Co-expression Network