G139784


Basic Information

Item Value
gene id G139784
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 7923182 ~ 7926832 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU175799
TGGGGTTTGACGCCGGAGCGCTGAGGTGAAAATGAAGTTCCCTGATGTGAGATCGGGCATGTCTCGGGGCCGGTGCGGACGGGGATCTGGTCGTGAAGAGATCTTGGATCCTCGGCCACAGCCCACCAGATTCCAGCCTCAGAACCAAGGTCAGCTGGAAGGTAGGGACAAGGAAAGGATCCACTGCAATCTGCTCCACACTCTGGCAGACATTTCCCTGCTCCACATACAAGTCAATAAGTGCTCCTCTCAAGCCACAAGGCTCGCTGGCTGCCAGATGAAGCAGCTCCTGGCCTATGTGCGCCATTAGCTGGTCAGGGATGAGAAGTTTGGAGCATTTCAGAGCACCGTTTTTCGCTTCAGTCAGACTGCATCCAATCAGGTCCACCACCTCTGTGCACAAGGTCTCCTCTAAGGGATCAAAGAACAGATCTGACTCGGATGTGGAAATTTGGTCCAGGACATCGGATCCTAAATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175799 True 481 TUCP 0.53 2 7923182 7926832

Neighbor

gene id symbol gene type direction distance location
AMCG00002954 NA coding upstream 59761 7847978 ~ 7863421 (+)
AMCG00002953 ndufb8,LOC102781364,LOC106577308 coding upstream 77312 7843544 ~ 7845870 (+)
AMCG00002959 NA coding upstream 93464 7828091 ~ 7829718 (+)
AMCG00002955 NA coding upstream 101719 7812509 ~ 7821463 (+)
AMCG00002952 pax2a,pax2 coding upstream 189645 7695359 ~ 7733537 (+)
AMCG00002961 NA coding downstream 11600 7938432 ~ 7946524 (+)
AMCG00002966 spock2,LOC108443083 coding downstream 28384 7955216 ~ 7998025 (+)
AMCG00002974 NA coding downstream 144152 8070984 ~ 8081794 (+)
AMCG00002973 LOC107595167 coding downstream 209908 8136740 ~ 8172504 (+)
AMCG00002976 NA coding downstream 279559 8206391 ~ 8213095 (+)
G139667 NA non-coding upstream 726085 7196878 ~ 7197097 (+)
G139656 NA non-coding upstream 770443 7152537 ~ 7152739 (+)
G139633 NA non-coding upstream 856808 7062523 ~ 7066374 (+)
G139572 a1cf,LOC107708930,LOC107695528,LOC107654048,LOC107739758 non-coding upstream 1500014 6420166 ~ 6423168 (+)
G139573 NA non-coding upstream 1504384 6418438 ~ 6418798 (+)
G139827 NA non-coding downstream 26294 7953126 ~ 7953340 (+)
G139832 NA non-coding downstream 71381 7998213 ~ 7999259 (+)
G139836 NA non-coding downstream 75970 8002802 ~ 8003057 (+)
G139837 NA non-coding downstream 76483 8003315 ~ 8003645 (+)
G139838 NA non-coding downstream 77072 8003904 ~ 8005450 (+)
AMCG00002960 NA other upstream 2274 7909252 ~ 7920908 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other upstream 543695 7376687 ~ 7379487 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other upstream 849644 7066855 ~ 7073538 (+)
G139492 NA other upstream 1770062 6147748 ~ 6153120 (+)
G139176 NA other upstream 2824438 5096731 ~ 5098744 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other downstream 110745 8037577 ~ 8044413 (+)
AMCG00002982 NA other downstream 566173 8493005 ~ 8496965 (+)
AMCG00002996 NA other downstream 1309908 9236740 ~ 9244099 (+)
AMCG00002998 NA other downstream 1373479 9300311 ~ 9316633 (+)
G140030 NA other downstream 1398656 9325488 ~ 9330464 (+)

Expression


Co-expression Network