Gene
RNA
| Item | Value |
|---|---|
| gene id | G8900 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 52839448 ~ 52902782 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU11001 | True | 1167 | lncRNA | 0.36 | 2 | 52839448 | 52902782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004516 | NA | coding | upstream | 589081 | 52249138 ~ 52250367 (+) |
| AMCG00004520 | NA | coding | upstream | 590422 | 52248670 ~ 52249026 (+) |
| AMCG00004515 | NA | coding | upstream | 595490 | 52243644 ~ 52243958 (+) |
| AMCG00004512 | ufc1,LOC107691797,LOC107574697 | coding | upstream | 602477 | 52233618 ~ 52236971 (+) |
| AMCG00004513 | NA | coding | upstream | 627036 | 52197328 ~ 52212412 (+) |
| AMCG00004531 | timm8b,LOC107598437,LOC107717885 | coding | downstream | 9228 | 52912010 ~ 52912584 (+) |
| AMCG00004535 | NA | coding | downstream | 12866 | 52915648 ~ 52916301 (+) |
| AMCG00004538 | NA | coding | downstream | 62432 | 52965214 ~ 52985350 (+) |
| AMCG00004541 | NA | coding | downstream | 108407 | 53011189 ~ 53014345 (+) |
| AMCG00004537 | NA | coding | downstream | 116200 | 53018982 ~ 53033256 (+) |
| G8836 | NA | non-coding | upstream | 217182 | 52619475 ~ 52622266 (+) |
| G8835 | NA | non-coding | upstream | 222596 | 52616536 ~ 52616852 (+) |
| G8817 | NA | non-coding | upstream | 285069 | 52553921 ~ 52554379 (+) |
| G8816 | NA | non-coding | upstream | 306430 | 52532729 ~ 52533018 (+) |
| G8811 | NA | non-coding | upstream | 469972 | 52369093 ~ 52369476 (+) |
| G8982 | NA | non-coding | downstream | 203962 | 53106744 ~ 53106997 (+) |
| G8987 | NA | non-coding | downstream | 214415 | 53117197 ~ 53119696 (+) |
| G9000 | NA | non-coding | downstream | 242813 | 53145595 ~ 53145794 (+) |
| G9043 | NA | non-coding | downstream | 396881 | 53299663 ~ 53299872 (+) |
| G9160 | NA | non-coding | downstream | 962158 | 53864940 ~ 53866447 (+) |
| AMCG00004509 | NA | other | upstream | 825818 | 51989353 ~ 52013630 (+) |
| AMCG00004501 | NA | other | upstream | 892630 | 51939549 ~ 51946818 (+) |
| G8606 | NA | other | upstream | 1724186 | 51114941 ~ 51115262 (+) |
| AMCG00004477 | NA | other | upstream | 2086016 | 50741388 ~ 50753432 (+) |
| AMCG00004463 | NA | other | upstream | 2596405 | 50236677 ~ 50243043 (+) |
| G9012 | NA | other | downstream | 280612 | 53183394 ~ 53183983 (+) |
| AMCG00004546 | dixdc1,LOC107715327,LOC107693513 | other | downstream | 356397 | 53259179 ~ 53270254 (+) |
| G9118 | NA | other | downstream | 700979 | 53603761 ~ 53607898 (+) |
| AMCG00004563 | NA | other | downstream | 733257 | 53636039 ~ 53670522 (+) |
| G9128 | NA | other | downstream | 745229 | 53648011 ~ 53843859 (+) |
