AMCG00007005


Basic Information

Item Value
gene id AMCG00007005
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 628775 ~ 639952 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007005
CAAAACGAAACTTTCTTCATTTGTAACTGCACGATGGCTAGATGTATCAATGACACTGTGATCGAAATAATCCCTTACGAATGCCCACCTCTGAAGAATATCACCTGTGCCAGTGGAAGACCTCCAGTTCTGGTGCTCGATGAGAACATGTGTTGCTACCATTACGAGTGTGACTGCTACTGCAATGGCTGGGGAGACCCCCACTATGTCACATTCGATGGACTCTATTACAGCTTTCAGGGGAACTGCACCTATACTTTGGTCAAGGAGATCATACCCAAATATGACAACTTTGGGGTTTATATTGACAATGTCCATTGTGACCCCAGAGACCAAGTGTCCTGCCCACGCTCTCTCATGGTCTCTTTTGAGACTCTATTCATCAACCTGAGGAATAAAGATGTCACTGGCGCTGTAGACATGGAGTTTGGTCCTAACGGTGGTGACTGGGAAACCTATGAGAATATTACAGCAGCTGGAATTAACATCTGCAAACAGCCAGAGGACATCGAATGCAGGGCTGAAAAATACCCCAACCATAATCTGGGCCAGTTGGGTCAGACGGTGGTGTGTGATGTGTCCACTGGGCTGATCTGCAAGAACAAAGACAATATGAATGCTGTTCCACCCAAATGCTATAACTATCAGATCAAACAAAACGAAACTTTCTTCATTTGTAACTGCACAATGGCTAGATGTATCAATGACACTGTGATTGAAATAATCCCCTACGAATGCCCACCTCTGAAGAATATCACCTGCGCCAGTGGAAGACCTCCAGTTCTGGTGTATGATGAGAAAATGTGTTGCAAGCATTACGAGTGTGACTGCTACTGCAATGGCTGGGGAGACCCCCACTACGTCACATTCGATGGACTCTATTACAGCTTTCAGGGGAATTGCACCTATACTTTGGTCAAGGAGATCGTACCCAAATATGAAAACTTTGGGGTTTATATTGACAATGTCCATTGTGATCCCAGAGACCAAgtgCTGGTGAACAGGCATGTGGTGTCGCTGCCCTTCTCCAGGTATGGAGTGAAGGTCTACAACTCTGGCATTAACCTGGTGCTGGAGATCCCCGATATCGATGTTGTGGTGACATTCAGCGGAATCGCCTTTGGTATTAAATTGCCTCACAAGATCTTTGGCAACAACACAGAGGGACAGTGTGGGCCCAAGATCGCCTCCCCAGACCCAGACAGGAGTGCGATGTCTGCTGACGCTTAG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007005 True 1230 mRNA 0.47 7 628775 639952

Neighbor

gene id symbol gene type direction distance location
AMCG00007007 NA coding downstream 46210 570135 ~ 582565 (-)
AMCG00007008 NA coding downstream 60252 566445 ~ 568523 (-)
AMCG00007010 NA coding downstream 63001 555074 ~ 565774 (-)
AMCG00007009 NA coding downstream 74621 553315 ~ 554154 (-)
AMCG00007004 NA coding downstream 119026 488655 ~ 509749 (-)
AMCG00007011 NA coding upstream 14914 654866 ~ 658913 (-)
AMCG00007006 NA coding upstream 29212 669164 ~ 670865 (-)
AMCG00007015 NA coding upstream 84509 724461 ~ 724961 (-)
AMCG00007031 NA coding upstream 258312 898264 ~ 900488 (-)
AMCG00007030 LOC103364536,LOC102291832,LOC101472382,LOC102208148 coding upstream 325554 965506 ~ 973794 (-)
G20510 NA non-coding downstream 33005 595477 ~ 595770 (-)
G20507 NA non-coding downstream 40173 588325 ~ 588602 (-)
G20501 NA non-coding downstream 82274 546056 ~ 546501 (-)
G20465 NA non-coding downstream 203997 423334 ~ 424778 (-)
G20446 LOC103368535,LOC104922780 non-coding downstream 275304 346274 ~ 353471 (-)
G20604 NA non-coding upstream 179023 818975 ~ 823764 (-)
G20607 NA non-coding upstream 189145 829097 ~ 829524 (-)
G20612 NA non-coding upstream 262967 902919 ~ 903735 (-)
G20614 NA non-coding upstream 266644 906596 ~ 936502 (-)
G20617 NA non-coding upstream 274178 914130 ~ 920107 (-)
AMCG00007001 NA other downstream 214649 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 266481 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 368539 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 396281 230324 ~ 232494 (-)
G20609 NA other upstream 205977 845929 ~ 917829 (-)
G20630 NA other upstream 312284 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1502723 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 2004953 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2836116 3476068 ~ 3500670 (-)

Expression


Co-expression Network