G20604


Basic Information

Item Value
gene id G20604
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 818975 ~ 823764 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU25686
CTCCATTTTAACTGAAGCCGGCTGTATGGAGGAAGGATTTCTCaataacagccccctctgagggtccaacgaggcaccttgtctccccaccatggaagtctgatgagccacaacccaccccagaggcacctcaccacagagggtcaacggggcatccacacccaaggtctgacgagccatcgcaacccaaagcctgttgatggtccaatcccctcacccccgatggccagcgagaggcctcctccagagggaagagcacagccagcagcaccgataaagaactttctgatctccttgctgctgtaataagtatactgcctggaggggaggcagccattaggcctgggccctaagccgtggaccaccagagattcattttctcctacatgccatccataggagttttttgtttttctctcctccgtgcctaaatggtttatttacttaaatgttcactcattttattctagattatgtaaaatgtttacaggtatatattttattttattgtatttatgtattttattttgctgtatgtttgttgtatgtttaccagtctgtaaagcgctctgtggctaccctgcgaagggcgctatacaaataaaaatggattgattgattgacactGCAGCTCGGACGCAGGTCACATCACTTTCAGATCAATACTCAGTCATCTGTGCCATGTGCTTGGAGCGGGTGTCTGTGTCCTTCTGTTTCTCCCACAACTCGTCAAACTCACCCGAACATTTTGCATACCCATTATTAacgttagattttttttttttatgcagctgcgcggtgaaacttttttttttcgttgtGGGCATACTACTTTGAAAGCCAAGTGTGAAGGCCAAtgaaatgacttttttttttcaaaatggtcAACTGTATGTGAATAGTGTtatggaattgcagaatgaagcatatagttttaatattcatattaatgacctgtgggaaatgtagtggagtaaaaagtacattattttgttcatagaTGGAGTAAAAGTAGCCACAACTAGTAAATACtgaagtaaagtacaaatacttgaAAAACATACTTAATTATACAGGAATTAAGTATTTGTACATCGTTATTTTATACCCCTGATAAGTGATGAGTAACTATATGGAGTGACAGAAAGATCCTCTCATTGTCACAAAATAAGTGTACTGTTGAGTGACGACTAAATCAAGgctgaaaataaatcttatgTCTCATGCCCAGATataatcatttcattttcaacttGATACAGAGGAACAATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25686 True 1274 lncRNA 0.41 2 818975 823764

Neighbor

gene id symbol gene type direction distance location
AMCG00007015 NA coding downstream 94014 724461 ~ 724961 (-)
AMCG00007006 NA coding downstream 148110 669164 ~ 670865 (-)
AMCG00007011 NA coding downstream 160062 654866 ~ 658913 (-)
AMCG00007005 NA coding downstream 179023 628775 ~ 639952 (-)
AMCG00007007 NA coding downstream 236410 570135 ~ 582565 (-)
AMCG00007031 NA coding upstream 74500 898264 ~ 900488 (-)
AMCG00007030 LOC103364536,LOC102291832,LOC101472382,LOC102208148 coding upstream 141742 965506 ~ 973794 (-)
AMCG00007032 galnt18,galnt18b,LOC106587200 coding upstream 270981 1094745 ~ 1113487 (-)
AMCG00007036 NA coding upstream 362877 1186641 ~ 1208036 (-)
AMCG00007035 arntl,arntl1a,LOC108439331,LOC105895625 coding upstream 441827 1265591 ~ 1285027 (-)
G20510 NA non-coding downstream 223205 595477 ~ 595770 (-)
G20507 NA non-coding downstream 230373 588325 ~ 588602 (-)
G20501 NA non-coding downstream 272474 546056 ~ 546501 (-)
G20465 NA non-coding downstream 394197 423334 ~ 424778 (-)
G20446 LOC103368535,LOC104922780 non-coding downstream 465504 346274 ~ 353471 (-)
G20607 NA non-coding upstream 5333 829097 ~ 829524 (-)
G20612 NA non-coding upstream 79155 902919 ~ 903735 (-)
G20614 NA non-coding upstream 82832 906596 ~ 936502 (-)
G20617 NA non-coding upstream 90366 914130 ~ 920107 (-)
G20676 NA non-coding upstream 166791 990555 ~ 991999 (-)
AMCG00007001 NA other downstream 404849 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 456681 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 558739 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 586481 230324 ~ 232494 (-)
G20609 NA other upstream 22165 845929 ~ 917829 (-)
G20630 NA other upstream 128472 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1318911 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 1821141 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2652304 3476068 ~ 3500670 (-)

Expression


Co-expression Network