AMCG00007006


Basic Information

Item Value
gene id AMCG00007006
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 669164 ~ 670865 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007006
ATGGGGAGGAACGCAGTGCAGAtcttcattttgtgtgttgCTATCACCTGCACTCTGGGAACCCAATTGAAAAAagGGCGCCCTGTCAACCACGTCCAGAAAATATGCAGCACCTGGGGTAACAAGCACTTCAAGACTTTCGATGGCGACGTGTTCCAGTTCCCGGGAATGTGTGACTACAACCTGGCCTCCGACTGCCACGAGTCCTACCTGGAGTTCTCGGTGCACTTACGTCGTGTGGAGATTGGTGGCCACCCCACCATCAACGAAGTGGTGATCAGAATCAAGGACGTGGACATCATGCTCAGCAAAACCCATGTGACGCTGGAACTGGACTCCAAATACATGAACCGCACTTGTGGTCTGTGTGGAGATTACAATGGCATCCCAGTCTACAATGAGTTCATTTCTGATGGTGACACCCTAAACCCCATTCAGTTTGGCAACCTGCAGAAGATCCAACTGCCCAATGACATCTGTGAGGACCCCTATGAGCAGGAGCCCAGCGCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007006 True 513 mRNA 0.52 4 669164 670865

Neighbor

gene id symbol gene type direction distance location
AMCG00007011 NA coding downstream 10251 654866 ~ 658913 (-)
AMCG00007005 NA coding downstream 29212 628775 ~ 639952 (-)
AMCG00007007 NA coding downstream 86599 570135 ~ 582565 (-)
AMCG00007008 NA coding downstream 100641 566445 ~ 568523 (-)
AMCG00007010 NA coding downstream 103390 555074 ~ 565774 (-)
AMCG00007015 NA coding upstream 53596 724461 ~ 724961 (-)
AMCG00007031 NA coding upstream 227399 898264 ~ 900488 (-)
AMCG00007030 LOC103364536,LOC102291832,LOC101472382,LOC102208148 coding upstream 294641 965506 ~ 973794 (-)
AMCG00007032 galnt18,galnt18b,LOC106587200 coding upstream 423880 1094745 ~ 1113487 (-)
AMCG00007036 NA coding upstream 515776 1186641 ~ 1208036 (-)
G20510 NA non-coding downstream 73394 595477 ~ 595770 (-)
G20507 NA non-coding downstream 80562 588325 ~ 588602 (-)
G20501 NA non-coding downstream 122663 546056 ~ 546501 (-)
G20465 NA non-coding downstream 244386 423334 ~ 424778 (-)
G20446 LOC103368535,LOC104922780 non-coding downstream 315693 346274 ~ 353471 (-)
G20604 NA non-coding upstream 148110 818975 ~ 823764 (-)
G20607 NA non-coding upstream 158232 829097 ~ 829524 (-)
G20612 NA non-coding upstream 232054 902919 ~ 903735 (-)
G20614 NA non-coding upstream 235731 906596 ~ 936502 (-)
G20617 NA non-coding upstream 243265 914130 ~ 920107 (-)
AMCG00007001 NA other downstream 255038 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 306870 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 408928 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 436670 230324 ~ 232494 (-)
G20609 NA other upstream 175064 845929 ~ 917829 (-)
G20630 NA other upstream 281371 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1471810 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 1974040 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2805203 3476068 ~ 3500670 (-)

Expression


Co-expression Network