G20507



Basic Information


Item Value
gene id G20507
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 588325 ~ 588602 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU25534
aaaaattattagacagaaaatagaggagcatcttaatgaaaaccatattcttggagatagtcaacatgggtttagatgaggcagatcatgtcttactaatttattagaattttttgaacatgcaactgcagctgtagatcatgtgaaagcatatgatatgatatacttagattttcaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaagtagatggattatgaactggttgatgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU25534 True 278 lncRNA 0.33 1 588325 588602

Neighbor


gene id symbol gene type direction distance location
AMCG00007007 NA coding downstream 5760 570135 ~ 582565 (-)
AMCG00007008 NA coding downstream 19802 566445 ~ 568523 (-)
AMCG00007010 NA coding downstream 22551 555074 ~ 565774 (-)
AMCG00007009 NA coding downstream 34171 553315 ~ 554154 (-)
AMCG00007004 NA coding downstream 78576 488655 ~ 509749 (-)
AMCG00007005 NA coding upstream 40173 628775 ~ 639952 (-)
AMCG00007011 NA coding upstream 66264 654866 ~ 658913 (-)
AMCG00007006 NA coding upstream 80562 669164 ~ 670865 (-)
AMCG00007015 NA coding upstream 135859 724461 ~ 724961 (-)
AMCG00007031 NA coding upstream 309662 898264 ~ 900488 (-)
G20501 NA non-coding downstream 41824 546056 ~ 546501 (-)
G20465 NA non-coding downstream 163547 423334 ~ 424778 (-)
G20446 LOC103368535,LOC104922780 non-coding downstream 234854 346274 ~ 353471 (-)
G20423 NA non-coding downstream 271211 310713 ~ 317114 (-)
G20424 NA non-coding downstream 278499 308009 ~ 309826 (-)
G20510 NA non-coding upstream 6875 595477 ~ 595770 (-)
G20604 NA non-coding upstream 230373 818975 ~ 823764 (-)
G20607 NA non-coding upstream 240495 829097 ~ 829524 (-)
G20612 NA non-coding upstream 314317 902919 ~ 903735 (-)
G20614 NA non-coding upstream 317994 906596 ~ 936502 (-)
AMCG00007001 NA other downstream 174199 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 226031 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 328089 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 355831 230324 ~ 232494 (-)
G20609 NA other upstream 257327 845929 ~ 917829 (-)
G20630 NA other upstream 363634 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1554073 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 2056303 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2887466 3476068 ~ 3500670 (-)

Expression



Co-expression Network