AMCG00007031


Basic Information

Item Value
gene id AMCG00007031
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 898264 ~ 900488 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007031
ATGCTACGCCCAGTTGGAATAATACCTCACCTCTCCTTACAGATCAGTACAGAGTGTATCTCAGGCTGCATGTGTCCTGAGGGGCTGGTTTCTGATGGGAAAGGAGACTGTGTACAGGAAGAACTCTGTCCTTGCGTCCACAATGGAGCTTTGTTCGAACCAGGGCAACAGATCAAAATGGACTGCAACACCTGTACTTGCAAAGACAGGAAATGGCAGTGTACCACTGACCAGTGCCATGGCACCTGTGCCATCTATGGAGATGGGCATTACACCACGTTTGATGGGAAGAGATTCAGCTTCAATGGAGACTGTGAATACACTCTCACTCAGGACTACTGCAGCAAGAACAGTGAAAATGGCACCTTCAGAGTGATCACTGAGAACATCCCCTGTGGCACCACAGGCACCACCTGCTCCAAGGCCATCAAGCTCTTCCTGGGGAACAATGAGCTGAAACTGTCAGAAGGAAACTACCAGGTGGTCCAGAGAGACACGGGTATAGAAGTTCCCTACCAGATCCGCTACATGGGTATCTACCTGGTGATTGAAGCCAACAATGGACTGATCCTTATGTGGGACAAGAAGACCAGCATGTTTATCAAACTGAGCCCTGAATTCCAGGGCCATGTCTGTGGTCTGTGTGGAGACTACGACGgcaacagaaacaatgactTCACCACCAGGAGCCAAGCAGTGGTTGTAGATGCGCTAGAATTTGGAAACAGCTGGAAAGTGTCTCCCAGTTGCCCCAATGCTGTGGTCACAAAGGACCCCTGTGTCTCCAACCCCTACAGACAGTCTTGGGCTCAGAGGCAGTGCAGCATCATCAAGAGCCAAGTGTTCACAGCTTGCCACTCCCAGGTGGACCCGTCTCCATACTATGAAGCCTGTGTGACAGACTCCTGTGCCTGTGACAGTGGAGGAGACTGTGAGTGTTTCTGTACAGCTGTGGCCTCCTACGCTGCAGCCTGCAATGAAgctggtgtttgtgtgtcctgGAGAAGCCCAGAGATCTGCCCACTGTTCTGTGATTTCTACAACCCCCCTGGTGAGTGTGAGTGGCACTACCAGCCCTGCGGATCTCCCTGCATGAAGACGTGCCGGAACCCCGCAGGGAAATGCTCCAATCAGATCCCAGGACTGGAAGGTAGGAGTTTGGTTTTAGAACCTTGTTACAGATGTTGTTCAACATAA

Function

GO: NA

KEGG:

id description
ko05206 MicroRNAs in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007031 True 1197 mRNA 0.51 7 898264 900488

Neighbor

gene id symbol gene type direction distance location
AMCG00007015 NA coding downstream 173303 724461 ~ 724961 (-)
AMCG00007006 NA coding downstream 227399 669164 ~ 670865 (-)
AMCG00007011 NA coding downstream 239351 654866 ~ 658913 (-)
AMCG00007005 NA coding downstream 258312 628775 ~ 639952 (-)
AMCG00007007 NA coding downstream 315699 570135 ~ 582565 (-)
AMCG00007030 LOC103364536,LOC102291832,LOC101472382,LOC102208148 coding upstream 65018 965506 ~ 973794 (-)
AMCG00007032 galnt18,galnt18b,LOC106587200 coding upstream 194257 1094745 ~ 1113487 (-)
AMCG00007036 NA coding upstream 286153 1186641 ~ 1208036 (-)
AMCG00007035 arntl,arntl1a,LOC108439331,LOC105895625 coding upstream 365103 1265591 ~ 1285027 (-)
AMCG00007037 NA coding upstream 477476 1377964 ~ 1383579 (-)
G20607 NA non-coding downstream 68740 829097 ~ 829524 (-)
G20604 NA non-coding downstream 74500 818975 ~ 823764 (-)
G20510 NA non-coding downstream 302494 595477 ~ 595770 (-)
G20507 NA non-coding downstream 309662 588325 ~ 588602 (-)
G20501 NA non-coding downstream 351763 546056 ~ 546501 (-)
G20612 NA non-coding upstream 2431 902919 ~ 903735 (-)
G20614 NA non-coding upstream 6108 906596 ~ 936502 (-)
G20617 NA non-coding upstream 13642 914130 ~ 920107 (-)
G20676 NA non-coding upstream 90067 990555 ~ 991999 (-)
G20726 NA non-coding upstream 477968 1378456 ~ 1381110 (-)
AMCG00007001 NA other downstream 484138 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 535970 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 638028 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 665770 230324 ~ 232494 (-)
G20630 NA other upstream 51748 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1242187 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 1744417 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2575580 3476068 ~ 3500670 (-)
G21426 NA other upstream 4141171 5041659 ~ 5049520 (-)

Expression


Co-expression Network