AMCG00007361


Basic Information

Item Value
gene id AMCG00007361
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 15874967 ~ 15890365 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007361
CTAACCagaggcacagagagacagagacacgcaAGGGGACTGAACACTACTGCAACAGCAGCGACTCAAGACAGAAGAATTTTGTGATATTCTAGGggggttatttttttatttttccttcattgctgccagtatatatttttattttctgcggTACAGCTCTGGGTGgggtttctgtttcttttgggggcaatctttttttttttacccggGGGGGGGGACAATTTCTGCCTGGATGCCTGTGGATATTGTGATATCCCCCCCAGAGGAGAGTTTCTGGACTGAGATGCACGAGAGTGAGATGAAGCTGAAAATCAGGGTGCGCAGGATGAAGGAGGGAAGGGAGCTGAGAGggGGCTTTGCAGCTTTCTCCTCCTGTTTCCCAGGACTGTGTGAGGGCAAGCCAGCGGCCATCTTGCCCATGAGCATTTCTCAGCCCTGTATGCCGGTGGCCAATGTTGGCCCAACGCGCATCCTGCCACATCTTTACCTGGGCTCACAGAAAGACGTGTTGAACAAGGACTTAATGGCCCAGAACGACATCACCTACGTCCTGAACGCCAGCAACACATGTCCCAAGCCGGATTTCATCTGTGAGAGCCACTTCATGCGCATTCCTGTCAATGACAACTATTGCGAGAAGCTTCTACCTTGGCTAGACAAAAGCAATGACTTCATTGACAAAGCAAAGGTCTCCAACTGCAGAGTCATCGTCCATTGCCTGGCTGGCATCTCTAGATCTGCCACTATTGCCATCGCTTACATCATGAAGACCATGGGCTTGTCCTCAGATGACGCTTACAGGTTTGTGAAAGACCGGAGGCCCTCGATATCACCCAATTTTAACTTCCTGGGGCAGCTGCTGGAGTTTGAGAAAGGCTTGAAGCTGCTCAAAGCTTGGTCCACCAGCCCTGGCAAGTCCCTGACGGAGAGGCATGAAGAGGAGCCCAAGCAGAAGCATGCAGAGACTGGCACTGGGAGCCCTGGAAGCCCAGAGAGTGGACTCAGTGGCCCAGGGGCCTCTGAGACAGAGCCGCGTTTGAAAATCTCTGAGGCAGAGGCTGAGCCGGAGAAAGGGGAGGCCAAGCTAGCGTCTCCGACATCGCTGCAGCAGGGCCTTATAGGCCTTCATCTATCGACTGAGCGAATCCTGGACACCAACCGCCTCAAGCGTTCCTTCTCCCTGGACATCAAGTCGGCCTACTCCCCCAGCCACTGCCCAAGGGCCATCCCTGCTGTGGCCATCACTCCCATGAACTCTGAGGACATCCCCAAGCTCTGCAAGCTTGACAGCCCTGGAACCACCAATGGCTTTTGCCAGTTCTCTCCAGTCCTGGACAGCccgggcagcagcagcagcagcagtggtggtggtagtggtgggGGCGGGGACTCGAGTGGGGAAGCCAGGACACGACAGCGGAGAAAAGGGAAGCACAATGGCAGCGCTGCAAGCTCTCCGGCCCACTCTTTGAGTTTGAACTTCAGCAGGACAGGGCCCGTGCACAAGAGCCCCAGCCTGGATGAGAACCTGAAGGCCTCGCTCTTGCTGAGCTTGCCCAATGGCCACCAGCCCCTCGTCGGCTCCAATGGGGTGTGGACCAACCACAGGGAGACAGTGCAGGCCACCACCCCAGGCACTCCCACTGGCGAGAGCCCCTGGTACTTTGGTGCTGACTCCCCAGCCTCTGGGACCTCCGTACGTTTCGGGAGCAGCTCGGCATACATGTCATTCGGATGTAGTGCGCTGGCGGGGAGCTGCGAGGGGGTTCGACTACGAGAGAAGCACGAGGACAGCACTGGCAGCACAGCAGACAAACAGTTCAAACGCCGGAGCTGCCAAATGGAGTTTGAGGACGGCATCTCTGAAACAAGGTCCAGGGAGGAGCTGGGAAAAATAGGCAAGCAGTCGAGCTTCTCTGGCAGCATGGAAATCATCGAGGTCTCCTGACATGCTGGCCAAGAAGGGGAAAAGGAACTGTTTCTTAGGGAAAGGGATttcaggggggagggggagaggggaagggcgtggttatttataatataaatcaattttttgttttcaattttgtgttttacGATTTAAACACTAAAGATGACAAAAAGTTCTGtagctctgtctgtctctgagcATGCCAGGAAAAAAGGGGGAGGAAGCAGCCATCTGCAATAGTTTctgtaacaagaaaaaaagagagaaagagagagaaaaggacagCTTCCAAATAAGATTGATAAGATGGGGGGGATGCTGAAACCAGTTGCCAAGAACTTCCCTACCAAACAAACAATGCATGTTCATTAGTACGCTTTTCAGTAAAATCCCAAATTTTCCCGTTGAATGTCTAAATTtgggaatttaaaaatacatttatgtttgcTGCTTCATCACACCATGGTGTCGAAAAACAAAGCGtggttcttttttgttgttgttgttcttcttctttttctttttgttaacaCGTCACGTTATGAAATGAGGAGCATATCACACTGCAGCACAAGGAAAAGCAATGGACTCAGAGCCCTGTGGTACCTCAGCACTGGTATTTCATGGTACTTTATAGATGAAGGATTGTTTGCAGGATGGGTCCTGTAATTCCCCGGGATGCTCATTTTCATGAAGAATTAAATGGCCACGCTGAGTTGTAATGGCTGCCATGGTGTATGGAAGTGtaaagtaaatgtgtttgaagGAAGTGAAAGGCAACGGTTTCCCCAGCTGCACCTCAGTTGTTTCTCCAAGTGTTGGTCATTGTAATTCAGAGTGACCCTGGCATTTCTGTGCTctaagtgtgtttgtttttgtgattgaaATCAGAAATCTATTGTTTCGGCCTAAACTGCAACAAGGTTTATTATTCCCAAGAATCTCTCTGGGAACACCCCACTTCCTGCTCCTCCCTCAGTGATTCTTTGAGCATGCTCAGAGCAGCTGGTAACAGACAGACAAGCTGTATAGAAACAGCACtaagctt

Function

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007361 True 2981 mRNA 0.51 5 15874967 15890365

Neighbor

gene id symbol gene type direction distance location
AMCG00007358 mob2,LOC102782240,LOC108411394,LOC106561048 coding downstream 99455 15756293 ~ 15775512 (-)
AMCG00007359 mob2,LOC108411394 coding downstream 118717 15750108 ~ 15756250 (-)
AMCG00007353 LOC107707550,LOC106953705,LOC103466147,LOC101079446,LOC106515651,LOC108239988 coding downstream 489965 15377618 ~ 15385002 (-)
AMCG00007349 NA coding downstream 561534 15288340 ~ 15313433 (-)
AMCG00007348 NA coding downstream 597009 15221097 ~ 15277958 (-)
AMCG00007363 LOC108428835 coding upstream 43782 15934147 ~ 15938530 (-)
AMCG00007362 ptpn5 coding upstream 88948 15979313 ~ 15988623 (-)
AMCG00007364 phlda2,LOC100705395 coding upstream 379602 16269967 ~ 16270377 (-)
AMCG00007374 abtb2b,abtb2,LOC107558307,LOC107675288 coding upstream 495020 16385385 ~ 16444113 (-)
AMCG00007373 b4galnt4 coding upstream 565168 16455533 ~ 16467687 (-)
G23225 LOC103376870 non-coding downstream 74015 15734625 ~ 15800952 (-)
G23105 NA non-coding downstream 743369 15131388 ~ 15131598 (-)
G23101 LOC101154678 non-coding downstream 850222 15024241 ~ 15024745 (-)
G23011 NA non-coding downstream 1394768 14478596 ~ 14480199 (-)
G22971 NA non-coding downstream 1685279 14184702 ~ 14189688 (-)
G23250 NA non-coding upstream 177718 16068083 ~ 16069464 (-)
G23344 NA non-coding upstream 488153 16378518 ~ 16380291 (-)
G23379 NA non-coding upstream 770516 16660881 ~ 16662665 (-)
G23397 NA non-coding upstream 815924 16706289 ~ 16709180 (-)
G23429 NA non-coding upstream 1058087 16948452 ~ 16948745 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 1841755 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 1928902 13945643 ~ 13946065 (-)
G22838 NA other downstream 2522894 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 5602272 10265045 ~ 10272695 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 5684763 10187308 ~ 10190204 (-)
AMCG00007366 NA other upstream 347096 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 430632 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 579102 16469467 ~ 16621905 (-)
G23661 NA other upstream 2165105 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 2312094 18202459 ~ 18208020 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013676 NA non-coding NC_007129.7 CM002902.2 49950732 ~ 49964921 (-)