AMCG00009337


Basic Information

Item Value
gene id AMCG00009337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34080494 ~ 34090966 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009337
ATGCTGCTTCGTGTACTGCCTTCAGTGTACAAGAAGCAGCCAGAGACCATAAACAGCCACATCAGGGAGCTGACAGCGCTTATCTATCTAAATGACCCCAGCCTGAACGACTCTGCCCTCAACATCCTTGTAGACGTTGCCCTTACCAACCCGTCTGCCATTACCAATTTTCTTCCCAATCTGAAGACAGCTGGAGATGAATTCCCAAACCTCCTTGGGCAAATAGCAAAGATCTACGGAGCTGTGGGACACACAGATGAGGAACAGGCCAGGAGCTGCCTAGTGTATCTCGTGACAATGCTGGCCAACATGGAGCACACGTTCCACCacaccctgctcctggagatcAAAGACATCACAGACACCTTCGGCAGCATCCTGGGAGCCTACAGCAAGGACATCTACCGCATGAGCAACAGTTTCACGGCCATCGCCAAGCTGCTGGTAAAGAAGCTGGAGACCGACCATGTGCTCACCAGCAGGGTTGAGGCTGAGGCGGAGGAATGTCCAAAGGCCTGTGAGCTGGAGTGTGGGGTCAGTGACGGCGATGAAAACGAGAAGCTGCAGGTGAAGATCCAGGCCTTCGAAGAGAAGATGACCGGTGAGAACAGCCCCCCGGGGCCGGTGCGCAGGTACAGTCTGGGCCAGGGCTCCaaggaggagaggaaagaaaTGAGATTCAACAGGTCAAAAAGCCTGGCTCTGCATGCGGTCCGCTCGAAATCCATCAACTCTGAGAACGGTCATGAGGGGGACAATGGAGAACTGCCCTCCGAGATCTGTCTCACAGAGGACTCACTCAGCCAGGAAAGCTGTAAGCTGCCTCTGGGGGTGGCACAAGATGACTGCAGCCCCCAGGGCCCTGCGTGTCTGGAGACCTGTGCTTCTGCCAGGGAAGCACCCAGCTCAGCAGACACCCAGAAAGAAGACAGTCAAGACAGGAGTAGCCTGGCTGACCAAGGCAACCTGCAGAACAAGGATCAGTTGTGTCAGCACCTCACCGAAAACCTCAGcgaaataaagacattttgtgCCGATATGGTGAAACAGATCCCTGTTCCAGAGCAGTGCATCATTGAAGGCAAGTCTCTTTAG

Function

GO:

id name namespace
GO:0042471 ear morphogenesis biological_process
GO:0007420 brain development biological_process

KEGG:

id description
K24027 MELT; protein melted

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009337 True 1095 mRNA 0.54 5 34080494 34090966

Neighbor

gene id symbol gene type direction distance location
AMCG00009334 veph1,LOC106581439 coding upstream 11923 34063564 ~ 34068571 (+)
AMCG00009330 NA coding upstream 74847 34001523 ~ 34005647 (+)
AMCG00009329 NA coding upstream 79421 33991608 ~ 34001073 (+)
AMCG00009324 NA coding upstream 502895 33534374 ~ 33577599 (+)
AMCG00009323 slitrk3,LOC107570382,LOC107705787,LOC107600237 coding upstream 559509 33515937 ~ 33520985 (+)
AMCG00009338 LOC107692013,LOC106581445 coding downstream 1760 34092726 ~ 34108014 (+)
AMCG00009336 NA coding downstream 28120 34119086 ~ 34121611 (+)
AMCG00009335 ccnl1 coding downstream 34063 34125029 ~ 34133695 (+)
AMCG00009343 NA coding downstream 129606 34220572 ~ 34254089 (+)
AMCG00009346 NA coding downstream 264773 34355739 ~ 34362436 (+)
G56379 NA non-coding upstream 1655 34045490 ~ 34078839 (+)
G56376 NA non-coding upstream 38235 34038134 ~ 34042259 (+)
G56282 NA non-coding upstream 623322 33456891 ~ 33457172 (+)
G56268 NA non-coding upstream 798730 33281537 ~ 33281764 (+)
G56262 NA non-coding upstream 970475 33109739 ~ 33110019 (+)
G56474 NA non-coding downstream 491981 34582947 ~ 34662345 (+)
G56495 NA non-coding downstream 871788 34962754 ~ 34963224 (+)
G56501 NA non-coding downstream 929268 35020234 ~ 35067229 (+)
G56541 LOC103376870 non-coding downstream 1447921 35538887 ~ 35539807 (+)
G56542 NA non-coding downstream 1484080 35575046 ~ 35576926 (+)
G56368 NA other upstream 49049 34000796 ~ 34031445 (+)
G56369 NA other upstream 61679 34015670 ~ 34018815 (+)
G56060 NA other upstream 1915129 32161760 ~ 32165365 (+)
G55591 NA other upstream 4085056 29995126 ~ 29995438 (+)
G55573 NA other upstream 4168930 29907911 ~ 29911564 (+)
AMCG00009345 NA other downstream 272453 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 1297948 35388914 ~ 35389327 (+)
AMCG00009404 NA other downstream 3202937 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 3257142 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 3331051 37422017 ~ 37463505 (+)

Expression


Co-expression Network