Gene
RNA
| Item | Value |
|---|---|
| gene id | G55204 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 28380980 ~ 28381299 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68977 | True | 320 | lncRNA | 0.51 | 1 | 28380980 | 28381299 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009176 | ephb3,LOC106613452 | coding | upstream | 258948 | 28101690 ~ 28122032 (+) |
| AMCG00009175 | NA | coding | upstream | 520854 | 27842533 ~ 27860126 (+) |
| AMCG00009173 | pcyt1a,LOC103040438 | coding | upstream | 612813 | 27757223 ~ 27768167 (+) |
| AMCG00009169 | NA | coding | upstream | 647170 | 27732555 ~ 27733810 (+) |
| AMCG00009170 | NA | coding | upstream | 684316 | 27687885 ~ 27696664 (+) |
| AMCG00009177 | NA | coding | downstream | 4307 | 28385606 ~ 28387362 (+) |
| AMCG00009181 | LOC101468118,LOC100701835,LOC102794991 | coding | downstream | 22824 | 28404123 ~ 28405444 (+) |
| AMCG00009180 | NA | coding | downstream | 71451 | 28452750 ~ 28460154 (+) |
| AMCG00009188 | sept2,LOC102290758,LOC102196852,LOC101486671 | coding | downstream | 107757 | 28489056 ~ 28505796 (+) |
| AMCG00009189 | NA | coding | downstream | 129264 | 28510563 ~ 28515851 (+) |
| G55203 | NA | non-coding | upstream | 225 | 28380392 ~ 28380755 (+) |
| G55202 | NA | non-coding | upstream | 610 | 28379515 ~ 28380370 (+) |
| G55184 | NA | non-coding | upstream | 55321 | 28325359 ~ 28325659 (+) |
| G54997 | NA | non-coding | upstream | 853486 | 27526067 ~ 27527494 (+) |
| G54969 | NA | non-coding | upstream | 958305 | 27420529 ~ 27422675 (+) |
| G55205 | NA | non-coding | downstream | 1701 | 28383000 ~ 28383503 (+) |
| G55257 | NA | non-coding | downstream | 83263 | 28464562 ~ 28465226 (+) |
| G55300 | NA | non-coding | downstream | 246364 | 28627663 ~ 28630297 (+) |
| G55308 | NA | non-coding | downstream | 251056 | 28632355 ~ 28633332 (+) |
| G55357 | NA | non-coding | downstream | 516677 | 28897976 ~ 28898693 (+) |
| AMCG00009164 | NA | other | upstream | 754969 | 27613583 ~ 27626011 (+) |
| AMCG00009129 | NA | other | upstream | 1584212 | 26793537 ~ 26796768 (+) |
| AMCG00009108 | NA | other | upstream | 2793365 | 25584882 ~ 25587615 (+) |
| AMCG00009104 | NA | other | upstream | 2887407 | 25489711 ~ 25493573 (+) |
| AMCG00009088 | LOC104966806,LOC108444346 | other | upstream | 3463117 | 24898116 ~ 24917863 (+) |
| AMCG00009204 | NA | other | downstream | 385155 | 28766454 ~ 28799600 (+) |
| AMCG00009207 | rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 | other | downstream | 547593 | 28928892 ~ 29011768 (+) |
| AMCG00009208 | NA | other | downstream | 722309 | 29103608 ~ 29108227 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | downstream | 790024 | 29171323 ~ 29174731 (+) |
| G55573 | NA | other | downstream | 1526612 | 29907911 ~ 29911564 (+) |
