Gene
RNA
| Item | Value |
|---|---|
| gene id | G55308 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 28632355 ~ 28633332 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0050662 | obsolete coenzyme binding | molecular_function |
| GO:0048037 | obsolete cofactor binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69110 | True | 612 | lncRNA | 0.50 | 3 | 28632355 | 28633332 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009191 | atg4b,atg4a | coding | upstream | 5186 | 28619193 ~ 28627169 (+) |
| AMCG00009187 | bok,LOC106574198,LOC106560644,LOC107733256,LOC107752647 | coding | upstream | 21769 | 28599918 ~ 28610586 (+) |
| AMCG00009192 | NA | coding | upstream | 35905 | 28593147 ~ 28596450 (+) |
| AMCG00009190 | farp2 | coding | upstream | 68247 | 28544328 ~ 28564108 (+) |
| AMCG00009189 | NA | coding | upstream | 116504 | 28510563 ~ 28515851 (+) |
| AMCG00009199 | LOC108241196 | coding | downstream | 43265 | 28676597 ~ 28723790 (+) |
| AMCG00009201 | NA | coding | downstream | 96064 | 28729396 ~ 28735853 (+) |
| AMCG00009200 | espnl | coding | downstream | 102951 | 28736283 ~ 28755174 (+) |
| AMCG00009198 | NA | coding | downstream | 123223 | 28756555 ~ 28762518 (+) |
| AMCG00009205 | NA | coding | downstream | 169637 | 28802969 ~ 28836412 (+) |
| G55300 | NA | non-coding | upstream | 2058 | 28627663 ~ 28630297 (+) |
| G55257 | NA | non-coding | upstream | 167129 | 28464562 ~ 28465226 (+) |
| G55205 | NA | non-coding | upstream | 248852 | 28383000 ~ 28383503 (+) |
| G55204 | NA | non-coding | upstream | 251056 | 28380980 ~ 28381299 (+) |
| G55203 | NA | non-coding | upstream | 251600 | 28380392 ~ 28380755 (+) |
| G55357 | NA | non-coding | downstream | 264644 | 28897976 ~ 28898693 (+) |
| G55394 | NA | non-coding | downstream | 395986 | 29029318 ~ 29031478 (+) |
| G55461 | NA | non-coding | downstream | 551589 | 29184921 ~ 29185184 (+) |
| G55463 | NA | non-coding | downstream | 553362 | 29186694 ~ 29187955 (+) |
| G55487 | NA | non-coding | downstream | 825089 | 29458421 ~ 29458743 (+) |
| AMCG00009164 | NA | other | upstream | 1006344 | 27613583 ~ 27626011 (+) |
| AMCG00009129 | NA | other | upstream | 1835587 | 26793537 ~ 26796768 (+) |
| AMCG00009108 | NA | other | upstream | 3044740 | 25584882 ~ 25587615 (+) |
| AMCG00009104 | NA | other | upstream | 3138782 | 25489711 ~ 25493573 (+) |
| AMCG00009088 | LOC104966806,LOC108444346 | other | upstream | 3714492 | 24898116 ~ 24917863 (+) |
| AMCG00009204 | NA | other | downstream | 133122 | 28766454 ~ 28799600 (+) |
| AMCG00009207 | rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 | other | downstream | 295560 | 28928892 ~ 29011768 (+) |
| AMCG00009208 | NA | other | downstream | 470276 | 29103608 ~ 29108227 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | downstream | 537991 | 29171323 ~ 29174731 (+) |
| G55573 | NA | other | downstream | 1274579 | 29907911 ~ 29911564 (+) |
