G56623


Basic Information

Item Value
gene id G56623
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36476438 ~ 36479375 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU70770
attagtatggtgttcctaataatcctttaggtgagtgtatatatatatatatatatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggataggaTTGATaggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70770 True 266 lncRNA 0.39 2 36476438 36479375

Neighbor

gene id symbol gene type direction distance location
AMCG00009378 NA coding upstream 59435 36410058 ~ 36417003 (+)
AMCG00009376 NA coding upstream 269940 36205885 ~ 36206498 (+)
AMCG00009377 NA coding upstream 270554 36204810 ~ 36205884 (+)
AMCG00009375 NA coding upstream 629757 35845970 ~ 35846681 (+)
AMCG00009372 NA coding upstream 1383552 35085474 ~ 35092886 (+)
AMCG00009380 NA coding downstream 35819 36515194 ~ 36515726 (+)
AMCG00009379 NA coding downstream 49571 36528946 ~ 36545717 (+)
AMCG00009381 NA coding downstream 96842 36576217 ~ 36611929 (+)
AMCG00009386 NA coding downstream 211458 36690833 ~ 36698116 (+)
AMCG00009387 NA coding downstream 224914 36704289 ~ 36731243 (+)
G56584 NA non-coding upstream 441743 35927372 ~ 36034695 (+)
G56582 NA non-coding upstream 550243 35925938 ~ 35926195 (+)
G56567 NA non-coding upstream 605398 35870828 ~ 35871040 (+)
G56542 NA non-coding upstream 899512 35575046 ~ 35576926 (+)
G56541 LOC103376870 non-coding upstream 936631 35538887 ~ 35539807 (+)
G56629 NA non-coding downstream 147820 36627195 ~ 36631814 (+)
G56698 NA non-coding downstream 395703 36875078 ~ 36875398 (+)
G56694 NA non-coding downstream 420918 36900293 ~ 36975061 (+)
G56712 NA non-coding downstream 549831 37029206 ~ 37029542 (+)
G56747 NA non-coding downstream 709193 37188568 ~ 37188778 (+)
G56536 LOC100846954 other upstream 1087111 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 2107181 34363419 ~ 34369257 (+)
G56368 NA other upstream 2444993 34000796 ~ 34031445 (+)
G56369 NA other upstream 2457623 34015670 ~ 34018815 (+)
G56060 NA other upstream 4311073 32161760 ~ 32165365 (+)
AMCG00009404 NA other downstream 814528 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 868733 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 942642 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 1051447 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 1128930 37608305 ~ 37616696 (+)

Expression


Co-expression Network