G59042


Basic Information

Item Value
gene id G59042
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45675703 ~ 45680120 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73798
gGATGGCCATCCTAGTGTGTGGGTGCAGGGTGCGGGATTTTAAAGAAACACGCACAAGAAAGCCTTTTAGTTTACAGTGTGctagttgtttattttcctgctctctcctccaCACACGTGCGACTGCTTCTCCAACTTCTATCACGATAACCTGGGAGAGGCCGTCTGTCGTTGGAGAGGGGGTCTCCATACAGGGATACATCATCGAGTACAGAGAGGAGAAGGAGCACAAGTCTGTTCAGTGGGTGCAGAAGAAAACAGCAACTGGACCCCACGAGAGATGCACACCACATGCTCACTAGGTTTATGACTGAGAGCTGCACTTTCGCGCATCCGCCCTTTGCTTTAACAGGTGGAAATACTGGTAATGAATTGTGAATCATTGTGTGGCGTTGTGTACAATGGGAGATATATGAGAGAGCAGCTccccatcacacacactgagagCTACTGCTAATGACCTGCTCTAATTCAAGTCACCTGTGTGGGCAGCACATACCTGCCGCCAATGTGGGACTACTATGTGAGGAGTGCGAAGCAGTGCGTCAGCAACTTAAGAATATTTGATTTCCAGTGTATGACCCTGTTCTGGTTGACAACCCGCCTTGTATATAACTGACCGTGGACCGGCTACTGAACCTGATTACGACTGATGACCCCTGCTCAAAATCAATTGTAAtggaattgtaatgcaatattgaataatatatgtgaagttttagGCTATATATTAATGGGCAATGGGAACTAACTTAGTTCACAGCTGGAGATTATCTCAAGATAGTACTGTACTAGGCAATTTAGTACAGCCTTAGAACTAATTCAAAGAttacacaactttgtgttacaATTTAccaataatgtgtatttttaacacagtAAATGTGGTTTCTCACACAGActtctgttaagaaatatatgttttgtaccttggtgaattttaacaaaaaattgTTGTCCTTAATCAAACAGACTGTTCCCTTTAACACATAATTTCTGAGAGTGTACATAGCTctgtactaactctgcaagtttgttgcaattgaccctaAAAGATTATAGTGTGTATTTGCCATCTTTTCAACTGTTCAATGCTTTAACAATAAACAAAGCCAATCTTTCAAGCTGAATTAAAGGTCTTATGAATGGTCTGTTAGAACCTCCTCCACATTATCCATGTTGTCTTGACCTTTCATCCCTAACTGGCTGACTGCTCTAGACTCTGATTGAGTGACTGATCTAGACTGTAATTGAGTGACTCATCTAGACTGATTGAGTGACTGATCTAGACTGTAATTGAGTGACTCCTCTAAACTCTGATTGAGTGACTGATCTAGACTGTAATTGAGTGACTCCTCTAGACTGATTGAGTGACTGATCTAGACTGTAATTGAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73798 True 1397 lncRNA 0.42 5 45675703 45680120

Neighbor

gene id symbol gene type direction distance location
AMCG00009756 NA coding downstream 217333 45457812 ~ 45458370 (-)
AMCG00009754 NA coding downstream 273288 45397189 ~ 45402415 (-)
AMCG00009745 mecp2,LOC105898998 coding downstream 324523 45345981 ~ 45351180 (-)
AMCG00009744 NA coding downstream 357375 45315275 ~ 45318328 (-)
AMCG00009746 LOC105912249 coding downstream 370330 45287018 ~ 45305373 (-)
AMCG00009771 smc1a coding upstream 3440 45683560 ~ 45695262 (-)
AMCG00009770 hsd17b10 coding upstream 21813 45701933 ~ 45704510 (-)
AMCG00009768 huwe1 coding upstream 25747 45705867 ~ 45738830 (-)
AMCG00009773 fam120c coding upstream 83057 45763177 ~ 45771249 (-)
AMCG00009776 NA coding upstream 94749 45774869 ~ 45781213 (-)
G59022 NA non-coding downstream 10862 45664474 ~ 45664841 (-)
G59003 NA non-coding downstream 40004 45635390 ~ 45635699 (-)
G59002 NA non-coding downstream 40389 45634682 ~ 45635314 (-)
G58982 NA non-coding downstream 46330 45591747 ~ 45629373 (-)
G58978 NA non-coding downstream 90332 45584803 ~ 45585371 (-)
G59077 NA non-coding upstream 65821 45745941 ~ 45746254 (-)
G59090 NA non-coding upstream 67437 45747557 ~ 45748458 (-)
G59099 NA non-coding upstream 79591 45759711 ~ 45763140 (-)
G59191 NA non-coding upstream 227134 45907254 ~ 45908142 (-)
G59202 NA non-coding upstream 228461 45908581 ~ 45964055 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other downstream 32959 45637747 ~ 45642744 (-)
AMCG00009755 NA other downstream 210326 45458743 ~ 45465377 (-)
AMCG00009748 NA other downstream 349648 45320757 ~ 45326055 (-)
AMCG00009742 NA other downstream 398106 45251637 ~ 45277597 (-)
AMCG00009739 NA other downstream 445246 45168941 ~ 45230457 (-)
AMCG00009769 phf8,LOC107563633,LOC106567021,LOC107716077 other upstream 68556 45748676 ~ 45757951 (-)

Expression


Co-expression Network