AMCG00010311


Basic Information

Item Value
gene id AMCG00010311
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 23734022 ~ 23761096 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010311
ATGCTCAGGATGTCGTCGGGACGGGGAGATCCCGGCACAAGTGACAGTGTGAGGGCAGCTCGGCGCGGAGTGGCGGTGCAGGGAGCAGCACTCACCAGTCCGCATCATACGGCACTAATGGTAGGATTTCCTTCACTGGGAAACAGGAATCTTGAGGAGATGAGGGAACATCTTGAAAGACAGaccagagagacacagaggctGCAGGAGGAGGTGGAGCAGGCTACCAGACTGACCATGGATAAAATCAGCAGGTCTCTTGAAGATAGCAGTCCCCGGCCACCTGGCAGCCTCAGTGTTACCCTAGATGGCCTCCTGGGAGTGACTTACGAGGATGTGCTGAGGTCAAGTGGTCAGTGTGTGCCTGACTCAGCTGATCCTGGCACTGAGATGAGCCTGTCTGTGAGGAATGGCCTGGAGCTGGAGACCCTGAGGAGGAGCTGCAGTTTTACTGGGAAGGAGCTGCTGGAGAGAGCGGTGGAGGAATATGCACAGCAGGTCCAGGAGCTGCAGAAGAAGCTGAGTGAGACATATGAACTTCACGAGCAGCACAAGTTCCACTTCCGCCAGTCCATCATCCAGCTGCAGACCAAACTGCAAGAAAGTCAGGTTGAGAAAGACGCTCTGGCTGATACCAGGCAGAAGGAGTGTCAAAGGCAGGCTGAGCTGGTCAACCAGCTGCAGGGCACTGTCAGGGAGCTAGAGGCGGCCAGGCACACCCAGGAGCAGAAGACACGGGAGGCCATCAACAGGATGGAGTTGCTCAGCGAGAAGAGGGAGGCGCAGGAAACGTCGTTGCGGGAAGTGCATTCCATCCTGCTTGTCTACGAGGAGCGCACTGGCAAAAAGGTGTACGAGAACGAGATTACAGCCAGCCTGCACAACCAAAACCTGGCCACCGCCGTGGGAAAGGTGCTCCGTGACCTGGAGGCCGAAAACTCCACCCTCCGGTTGAGAGTCCTTCCGGTAGAGGAGCAGCTGGGGGCTGTGAAACGGGAGGCACAAGGCCAAGCAGACCTGATGAGGCAACAGCACCAGCAACGAAAGGAGCAGCTCATTTTCAGTCATGAACAGGAGGTGGCAGCGCTGTCTGAAAAACTGAGCAGCTCTGGCAGCCTTGCCCTGAGCATCCAGAGCCAGATGGAACAAGCAACAAGCCAGAATTCCCTGTGCCTTCGGCAGGTCACTGAGCTGGAATCCACGATGGAGAGTCTGGAGAAGACGCTGATCCTGACCCGCACAGAGGCAGAGGAGGCACAGTGCGAGAGGGATCAGTACCGCCAGCAGTCTGGGGACCTCGAATCCCAACTCTGCCAGCTCAAGTCAGATCTACACAAGACTCGGGAGGAGCAGAGCCTGGAGAAGGAGCAGAACAAACGTCTGTGGCACCGAGACGCAGGGAACAGTGTTGCCATTGACAACCTGCGGCGAGAGCTCGATGAGAAGAGCGTGGAGATTCAGCGCCTGGAGGCCACAAGCGTGGAGATTCAGCGCCTGGAGGCCACAGTGACGTCACTCAGAGAGGAGTGCCGGGTTCAGGTCGACCGCCAGTTAGCAGATGAGCAGAGTAAGAACAAGAGCTTGGAGGAGGTGGCATGCCTGCGCCAAGAACTGGAGGCCACCAAGGATCTGCTGCTCCGAGCCAGGGAGGAATTGAAAAACGACAGGGCACTGCTGGAGGAGAGGATAAGAGATGTGGAGGAGGCAGAGCTGGAGAGGAAAAAGATGCAAGTGCTACTGGAGGAGAGGGGCCAGGAGATGATGCAGAGACAGGAGGAGGCCCAGCACAGCAGGGCCCAGTTAGAGGAGGCCCTGGACTGCCTGAAGAGCCTGCAAGGGGAAGGAGAGGCCGTGAGACTGAGACTGAGTGAGAAGGAGAAGATCGTGAACATGATGAGACAGCAAATGGAGAACGTCACACACATTGCCGGGCAACAGAGCCAACACTGCGAGACCCTGCATGGCGAGAAGGTGGAGCTGCTCAACAACGTCAACGAACACAAGCTGGAGATCCAACAGATTAAGGCAGACTGTGAGGTGAAGGACTGCAGGTTGAgtgagctggagcaggagcgGGTGCAGCTGCTCAGTGCCTTGTCGGACAAAGCCTGCTGTGTGAAGGAGCTCATGATGGAAAAGCAGCAACTCACCGCTGAGCTGGAGTTGCAGCGCAGGCAGCTGGTCAGCCTCACAGAGGAGCATAAGAGAATAAGACTGAGGAGACAGGAGAGTAAGAGTGAAGAGACAGACAACTTGGCTGCTAAGCTGAAGGCCCAGCTAGCCACCACCAGGAGCGAACTGGAGCAGACCAAGAGCAAACTGTGGGCCCTGGAGGGGTCAGACGGCCATGCCGAAGCGTTAGCCCTTGACTGTCTGGTAAAGgAGAAACGCAACCAAGCATCAGAAAGCAGCCGTCTGAGCCAGGAGCTGGCATTAGTGACCTCTGAGAAGAACAGGCTAGGGACTGAAGTGGAAACATTGCGGTCCCTGGAGAGACAACTGAAAGACAAAGTGGCCAAGCTGGAGGCAGCCCTAGACAAGCTTTCTGAGAGGTTTGCTGAATGCCAAGATATGATCCAGCAACAGGAGCAAGATTTCATGCGTCTCAAACTTCAACATGCTCTAGATGTAAAGGAGCTTCAGGGTCCTATCTTCAGAGTCCCTGGCAATCAGCAGAAGCCTTATTCCTATTCAACCACACTGCCCACTTCCCAGCAGACCTCTGGTTACCTCTCTGCTAGTGTGATTGAATGTGACAGCAGCTCCTCCAACCGCTCCCAGAGGAGGAGAAATGAGGTGACGAAGGACACCAATGGCACCACCACACTGACCAAGGATAGCTTCAGTAGCCGGGACCCACTAACTTTACGCATGGTGGACCTCGCCGATGGAAACGTTTACAGCGTCCAAGCCACCGAGGGTGAGTACTCGCAGAGCAGCTACATCCCTTTATTGTACCAACCACCAGTAGCTGTGCTCTTAACACCCCCACGCTGCATGTCTGTCCTGCACAATGCTCTGAAACCCAAGGCTGCAGCGGATTTCATCAACTATGAGCTGTCATTCCTGTCTGCCGCTCCACGCTACACCTCCTCTCCTGGGACGCTGGCTGCAGGCCGAAGATCCCCAGTGCACTCCCTGCTCACCGCCCCACTCGCCACCTCCAGTCCTCAGCCAGGGCAGACCAATGAGGGCCCCCTCACAGAAGTCAGCATGATGGCAAATGAGCAGGGGAAAGTGACGGGACAGACGTGCAAGAAATTACAAGGCAGACTGGACAACCTACAGAACCTGGTGGAGGACCTACAGATTAAAAACCGAGaaatgtctgcCATGATCAAAAACCaagagaagaggaagaaagTAAAGGACAAAGAAGCCTTTTAACAAACCGAATGAATTAAATCATACATGTATAGTATCTAAAACCCTGGTCAAACACCTTGGAGTagagaatatattttcttcacacaaagaATATCCTCTTTCCTGGGTTGCATTAGAGTCCAAGGGGCACCATAAGGACACAAAGCAATTATCGAATGAACAGTAAGAAACACTACTCGTGTCCATGCACTAGATTTGCACTGCGGATGAAGGGGACAGATGGGAatgcagaagaaagaaaactctGAAGTTACATTTACTTTTAGGTACAGACAAAGCTTTATTAAAGACTTGCTTTTCTCCAATTTTAAAAGGTTTCTGCAATCACATCAATATGTTGCATTGAGACACCAAATTTGCATATATATGCATTgatcacaaaagaaaatatagtgGAATGACAAGGTTTTACTTACATTCACAATTCAGTATTTACCTACAATAATACTCAACTTCATAAGTTCGCTTTGGTAAACAAGtacatcttaaaatattaatgaagaTAAAACCATTACCCAAATCTCCATGACCTTTGTAAGGAAGGGGAGCATACATAGTTCTGTCTGGAGCACTGAAGTGCCCATTACCTCGGTCTCAGAATTATGGTGCATTATTCGGTTTTGGTTTAGATAAAGGCTCAGACTAATCTTTTAATACAACACTGGCTGAGGTCAGGCAATTGGGTTTGTAATGCCGCAGAGATCTCACTTcccaatgtttttaataatagaCTTTGAATTGGCTcagacagttaaaaaaaaaaaaaaatgcaatttactaTACTGTGTTAATAttctcaaaaaacatttttatttaaattttattgtttaaaaattcTTAAAACTCAGTTTGCTTTAGAAGTGTTCAAAACTGGGGTTCCCCATCTCTACCACCTTCCGCTGACATCTTGCTTTCTAAAGCCAATTTAGAtcaaggacaaaaaaaaatatatatttctttaaatgggAGGGTTAATAGCCCCCTAAAAGTTGAAGAGCCAGACAAAAATAGCTGCAGAAAATTCACAAGACTAGAGCTGAATAGTTGCAAGTATTATTCTGTCCTGGGTTAAGCAAGACCAGAAAATCGGTGAGAAATCAGTCGAGTGCAGCAATGAGAATTATGGTTTCCGGGAATTCGCAGCAGCAAGCCAAGTacatattgcaaaacaaatttgtaTAAAAGTAAAAAGGGAGGGGAGAACAGAAAGACAAGAATATCCACATGCACAATCATGTTTAAGACTCTACAAGAGTTTACACATACCATATTTCAACTTAAATCCTTCTAGACTAGATCTTGTGAATGCATCTCTCTCAATGAAGCTGTTGGAGTGACTAAAACCTCTAGttgacaaaatgaaaactgcatttGTGGAAAGCAGGTGCACTCCTGCAATCAGATTTTGACATGGTGTTCACATGAGTGGTACCCatgttttacaatacagatCTACAAGAAGGCTGTCATGGTATTTGGATCGCTGTCGGTGCAAGGTCTAACTAAAGTTCTtcaatgcatacatttcatGCAACCCCACATTTTGAAGCATGTTACAGTGAAACCACTTGTTCCAAATCTATCGCATTGGCTAACTCTATAGATAACATGCTGCCGATCTAACTTATCGTAGCtcaaagcacaaaaacaaaaagccacaaTCACGTGATCTAATGCAGGAGGGTGCATGCCCATGTGAGCTAGATTTAATGATAATgccaggaaaaataaacagtttaataacGTAATGTAATGCAATCCTAATACTTGTGCATTGTGACCGATCAACAAGCAGTTACATTTGACTACCTCTGTTGCAAATGAAATTAAGCCACTAACTTGACACAATGTATATGCCCACTTCATTATGGTTTTGAACGCCTTGGATGCAGACTCTGCATGATGGTGTGGGCATTGGTGTAGCACAAGATTAGTTGACACTCCAGGTTGCGTTTTTTGCGGAAGGGCATAGACCACCGAGGTGACGGGCGATTCAAATTGTACAGCTGCTCAAGTCTGTAGTGATGGAACTTGTGTGGGAAGAACTGAGGAAAATGGTTTGCCTACATGGGAGGAGAGGTATTCTTCAAATGAAACCCTTCCCCGCCCCACCATGATGGCCCTATCAACAGGTAAATCAGTTTCCCTCATTCCTTTCCCCTCTGCGGATTGATACAAACCTCTTGAAGCAGTCAGCCTCAAATCACCCATCATCGATCCATACCCCTCCCAGAAAACGCCACCCGCATAGGTCAAAGACATCGTTTCACGCGGCACTATGCGTTCACGCTAACGAAACCACCAGCTGATCAGAGGTAGCCCCACCATTTGTGTGCCTGGATGTCGTCTCGTCCTGTGTCCAGGTGTCTGTTGCAGCACTCCTCCCAGCGGCGGACCTTCCCTTCTTCCACCATGACGAACTTCCACTCTAGCTCGCAGTCGGACGGGAGCGGGATCGAGTTGCACCAGAAACCGTCCTTGTCTTGGTTCAGCGCTACATAGCTCTCCCAGCTGCCCAACTCCTTGTGATTGCCCGTCACCGCCAGCTGCTGAGAGGGGGAGTGAGTGATGTAGTGCACCTTGAAGCTCACCCCTACGCTCTGCGGCATGGGCTGCACAGCGGCCACCTTCTTGCCCACGGGATCGGATTCCAGTATACCAGCGGCTTTGGCCTCTTCCATTAAACCTTCAACCGGTGTGGAGTCCTCCGGCTCGCCTTCTGGGTCCTCTAGGTCAACCTCCTGCAATCTGTCCGAGCTGCCAAGGTTTAACTTGATTGCTGACCAGTTCTCATTGAGCCACTCGTTATCATTCATAGTGGCCTCCATGATGCTGATCTCAGTCTTCTCCCACTTGGCGTCCACATCAACATCCGCTTCCCCAGGCTTTTTCTCAGCCCCCACTGTCTCGATCTTTGCAGCAGACAGATCGCCACCATTGCTCAGATATTCAGGATGGTCAGGCACAGAGCTAGGATGGTGTTCTTCAGCAGCAAGCCGGTCCACTTTATCTGGTGATGAAGAATAAGGACCAGCCCCGTGGTCGCTCTCAGGGACTGAGGACATGTCCTGCAGTAATTCCTGTTCTCTGGGTTCTGCACTGCAATCATCCTGGGTTTCAGATACCTGGCACCCATTTTCCTTTGGTTTATCTGTTGCCCCTGCGTCGCCTGCGGCTCTCGGCCTCTGCTTCACCTCGTCCTGCACAGAAACCCCATTCTCGTCCCCTGGCGATTTTGGAGACGCCAGACTTctatatatgaagaaaaaagcCCATAGTGAGAGCATTACAATAATCCCCAAAGCCAGGGATGGTCCGTATCCTCCAATCATGACACAAAAAAGAACTAATCTCGGGTCGGGCTAAAGCTGCTGGTGCGCTTTTCTTGCGGATGATTATGTGCAGCCCGAGTTTCTCCTGCCGTCGCGCACGTCGCCAGC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010311 True 6827 mRNA 0.50 26 23734022 23761096

Neighbor

gene id symbol gene type direction distance location
AMCG00010312 NA coding downstream 11117 23714037 ~ 23722905 (-)
AMCG00010305 NA coding downstream 67492 23647391 ~ 23666530 (-)
AMCG00010302 nup54 coding downstream 91392 23628651 ~ 23642630 (-)
AMCG00010307 NA coding downstream 136279 23591024 ~ 23597743 (-)
AMCG00010306 NA coding downstream 144370 23585561 ~ 23589652 (-)
AMCG00010318 NA coding upstream 77890 23838986 ~ 23841268 (-)
AMCG00010317 NA coding upstream 81604 23842700 ~ 23853390 (-)
AMCG00010316 NA coding upstream 100798 23861894 ~ 23871756 (-)
AMCG00010326 fech coding upstream 506136 24267232 ~ 24290661 (-)
AMCG00010327 nars,sync,LOC106572225 coding upstream 534051 24295147 ~ 24306861 (-)
G79648 NA non-coding downstream 267811 23461762 ~ 23466211 (-)
G79595 NA non-coding downstream 402507 23327498 ~ 23331515 (-)
G79594 NA non-coding downstream 406661 23326988 ~ 23327361 (-)
G79548 NA non-coding downstream 586953 23141385 ~ 23147069 (-)
G79542 NA non-coding downstream 624930 23108853 ~ 23109092 (-)
G79837 NA non-coding upstream 546808 24307904 ~ 24310189 (-)
G79872 NA non-coding upstream 840036 24601132 ~ 24650632 (-)
G79881 NA non-coding upstream 962739 24723835 ~ 24759263 (-)
G79882 NA non-coding upstream 1039573 24800669 ~ 24804163 (-)
G79963 NA non-coding upstream 1963381 25724477 ~ 25724677 (-)
G79601 NA other downstream 369075 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 647677 23082655 ~ 23086345 (-)
AMCG00010271 NA other downstream 1751972 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 2161510 21541019 ~ 21572512 (-)
AMCG00010247 NA other downstream 2652197 21053624 ~ 21081825 (-)
AMCG00010343 hook3 other upstream 1754968 25516064 ~ 25556080 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 2606836 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 2651114 26412210 ~ 26426658 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 6191594 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 6749874 30510970 ~ 30520381 (-)

Expression


Co-expression Network