Fish Transcriptome and Expression Database

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model fish

XLOC_006071 (CR762493.1)

Basic Information

Item	Value
gene id	XLOC_006071
gene name	CR762493.1
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007124.7
NCBI id	CM002897.2
chromosome length	52186027
location	30836656 ~ 30836776 (+)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011984
agccacagccatatcaccctgcagcccaagacaagttactcactgaagctaagcatgcagggctgagcctggttagtacctggatgagagatcACATGAGAAAACTatgttgctgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000080170

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00011984	True	121	rRNA	0.48	1	30836656	30836776

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_006070	cxcl12a	coding	upstream	16941	30804367 ~ 30819715 (+)
XLOC_006069	cxcl18a.1	coding	upstream	137287	30696286 ~ 30699369 (+)
XLOC_006068	CR762483.1	coding	upstream	140662	30692669 ~ 30695994 (+)
XLOC_006067	NA	coding	upstream	159013	30676825 ~ 30677643 (+)
XLOC_006066	ppifa	coding	upstream	260857	30572172 ~ 30575799 (+)
XLOC_006072	ercc6	coding	downstream	37377	30874153 ~ 30910016 (+)
XLOC_006073	drgx	coding	downstream	75341	30912117 ~ 30920265 (+)
XLOC_006074	NA	coding	downstream	83778	30920554 ~ 30928661 (+)
XLOC_006075	vstm4a	coding	downstream	114379	30951155 ~ 30967784 (+)
XLOC_006076	lrrc18a	coding	downstream	165882	31002658 ~ 31005889 (+)
XLOC_006065	AL844152.1	non-coding	upstream	324933	30511607 ~ 30511723 (+)
XLOC_006063	AL929330.1	non-coding	upstream	584799	30251741 ~ 30251857 (+)
XLOC_006056	NA	non-coding	upstream	944836	29889189 ~ 29891820 (+)
XLOC_006054	CT025909.2	non-coding	upstream	1081229	29755293 ~ 29755427 (+)
XLOC_006101	NA	non-coding	downstream	969744	31806520 ~ 31850508 (+)
XLOC_006102	NA	non-coding	downstream	1118444	31955220 ~ 31978484 (+)
XLOC_006103	NA	non-coding	downstream	1268489	32105265 ~ 32108472 (+)
XLOC_006105	CR769766.1	non-coding	downstream	1555607	32392383 ~ 32392499 (+)

Expression

Co-expression Network