XLOC_006054 (CT025909.2)


Basic Information

Item Value
gene id XLOC_006054
gene name CT025909.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 29755293 ~ 29755427 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011936
tctgcaactctaaGAAACAGAatgtactttaagtgtgtgttctATTCCTTTGTgggcccactgaagctaagcagggctgtgcctggtcagtacctggatgtgagaccacatgggaaagctaggttgctgccagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000085022

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011936 True 135 rRNA 0.48 1 29755293 29755427

Neighbor

gene id symbol gene type direction distance location
XLOC_006053 CT025909.1 coding upstream 164178 29590994 ~ 29591115 (+)
XLOC_006052 chst3a coding upstream 234441 29510023 ~ 29520852 (+)
XLOC_006051 lrit2 coding upstream 280989 29470442 ~ 29474304 (+)
XLOC_006050 lrit1a coding upstream 287735 29462249 ~ 29467558 (+)
XLOC_006049 NA coding upstream 305572 29446817 ~ 29449721 (+)
XLOC_006055 pax2a coding downstream 15410 29770837 ~ 29805529 (+)
XLOC_006056 NA coding downstream 133762 29889189 ~ 29891820 (+)
XLOC_006057 cuedc2 coding downstream 169970 29925397 ~ 29936259 (+)
XLOC_006058 dnajb12a coding downstream 279826 30035253 ~ 30046753 (+)
XLOC_006059 spock2 coding downstream 299569 30054996 ~ 30132256 (+)
XLOC_006042 NA non-coding upstream 657767 28915538 ~ 29097526 (+)
XLOC_006044 NA non-coding upstream 672002 29083087 ~ 29083291 (+)
XLOC_006043 CU639469.2 non-coding upstream 830328 28924846 ~ 28924965 (+)
XLOC_006063 AL929330.1 non-coding downstream 496314 30251741 ~ 30251857 (+)
XLOC_006065 AL844152.1 non-coding downstream 756180 30511607 ~ 30511723 (+)
XLOC_006067 NA non-coding downstream 921398 30676825 ~ 30677643 (+)
XLOC_006071 CR762493.1 non-coding downstream 1081229 30836656 ~ 30836776 (+)

Expression


Co-expression Network