XLOC_006053 (CT025909.1)


Basic Information

Item Value
gene id XLOC_006053
gene name CT025909.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 29590994 ~ 29591115 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011935
cagccatatcaccctgcagcccaagaccggctGCCAAGACCGGCAgccctgaagctaagcagggctgagtctggtcagtacctgaatgggagaccacatggaaagctaggttgctgatAAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081997

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011935 True 122 rRNA 0.56 1 29590994 29591115

Neighbor

gene id symbol gene type direction distance location
XLOC_006052 chst3a coding upstream 70142 29510023 ~ 29520852 (+)
XLOC_006051 lrit2 coding upstream 116690 29470442 ~ 29474304 (+)
XLOC_006050 lrit1a coding upstream 123436 29462249 ~ 29467558 (+)
XLOC_006049 NA coding upstream 141273 29446817 ~ 29449721 (+)
XLOC_006048 ogdhl coding upstream 184299 29352842 ~ 29406695 (+)
XLOC_006054 CT025909.2 coding downstream 164178 29755293 ~ 29755427 (+)
XLOC_006055 pax2a coding downstream 179722 29770837 ~ 29805529 (+)
XLOC_006056 NA coding downstream 298074 29889189 ~ 29891820 (+)
XLOC_006057 cuedc2 coding downstream 334282 29925397 ~ 29936259 (+)
XLOC_006058 dnajb12a coding downstream 444138 30035253 ~ 30046753 (+)
XLOC_006042 NA non-coding upstream 493468 28915538 ~ 29097526 (+)
XLOC_006044 NA non-coding upstream 507703 29083087 ~ 29083291 (+)
XLOC_006043 CU639469.2 non-coding upstream 666029 28924846 ~ 28924965 (+)
XLOC_006039 NA non-coding upstream 773112 28808092 ~ 28817882 (+)
XLOC_006063 AL929330.1 non-coding downstream 660626 30251741 ~ 30251857 (+)
XLOC_006065 AL844152.1 non-coding downstream 920492 30511607 ~ 30511723 (+)
XLOC_006067 NA non-coding downstream 1085710 30676825 ~ 30677643 (+)

Expression


Co-expression Network