G106310


Basic Information

Item Value
gene id G106310
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20952222 ~ 20952712 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133024
GCTGTTGGAGAAAGACCCAGAGTTGCGGCTGGGCGCCGGGGAGCGCGGAGTGGAAGACGTCAAGGCCCACCCCTTCTTCAGGAGTGTGGATTGGCCAGCGCTGCTTGCTAAGAGAGTGACGCCTCCCTTCATCCCCACAATCAGCGAGCGTGAGGCCATATGCAGCTCCGCAGCCACTGTGTTCACTCTGCCCCACAAGCGCAGGGCCCTGACTGAAGAGGAGCAAGAGCTCTTCAAAGACTTTGACTACGTGGCCGACTGGTTCTAGTGCCAGCGCTGGGGAAACGAGCAAGAgagtgacacacagagacagacagacattgagAGCAACACAGAACATCagctctccccctcccctCCTCCcctcacacgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133024 True 375 lncRNA 0.59 3 20952222 20952712

Neighbor

gene id symbol gene type direction distance location
AMCG00011373 NA coding upstream 213198 20738382 ~ 20739024 (+)
AMCG00011364 NA coding upstream 956252 19987249 ~ 19995970 (+)
AMCG00011363 NA coding upstream 994588 19956472 ~ 19957634 (+)
AMCG00011361 NA coding upstream 997135 19954620 ~ 19955087 (+)
AMCG00011359 NA coding upstream 1033033 19914612 ~ 19919189 (+)
AMCG00011374 NA coding downstream 2082 20954794 ~ 20958447 (+)
AMCG00011380 NA coding downstream 174398 21127110 ~ 21131535 (+)
AMCG00011381 NA coding downstream 274498 21227210 ~ 21236755 (+)
AMCG00011387 NA coding downstream 366712 21319424 ~ 21385863 (+)
AMCG00011388 LOC105008787,LOC106604502 coding downstream 839816 21792528 ~ 21797963 (+)
G106298 NA non-coding upstream 44569 20907450 ~ 20907653 (+)
G106277 NA non-coding upstream 336581 20615438 ~ 20615641 (+)
G106138 NA non-coding upstream 937874 19978247 ~ 20014348 (+)
G106134 NA non-coding upstream 956235 19957005 ~ 19995987 (+)
G106071 NA non-coding upstream 1148747 19803171 ~ 19803475 (+)
G106327 NA non-coding downstream 67498 21020210 ~ 21022119 (+)
G106347 NA non-coding downstream 76081 21028793 ~ 21033188 (+)
G106361 NA non-coding downstream 178986 21131698 ~ 21132430 (+)
G106362 NA non-coding downstream 181543 21134255 ~ 21134613 (+)
G106391 NA non-coding downstream 262909 21215621 ~ 21241493 (+)
G106242 NA other upstream 584999 20361208 ~ 20367223 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other upstream 612897 20296011 ~ 20339325 (+)
G106139 LOC108275110 other upstream 789256 20095229 ~ 20162966 (+)
G105916 NA other upstream 1729801 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 1834853 19107273 ~ 19117369 (+)
G106613 NA other downstream 2388596 23341308 ~ 23341765 (+)
G106618 NA other downstream 2403350 23356062 ~ 23356559 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other downstream 2795962 23748674 ~ 23753002 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other downstream 2883107 23835819 ~ 23844911 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 4655274 25607986 ~ 25662179 (+)

Expression


Co-expression Network