AMCG00011359


Basic Information

Item Value
gene id AMCG00011359
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19914612 ~ 19919189 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011359
ATGAGAGATGTATCCAGCAAACCTTCTCCTCCCGTTAAGCGGGAGCTTTTACGACACAGGGACTACAAGGTGGACCTGGAGTCTAAACTGGGTAAAACAATCGTCATCACCAAAACCACTCCCCAGGCGGAGATGGATCAGAGAAATCTGGGGATGTCCATGCGTGTGGAGCGCTCTTCTCTTGACCAGGTGAAGAAGCGCTTTGAGGAGGAGAAAGCAAAGgcatacaaaaaggaaaagcagaagGAGAAGAAGCGCAAGGCGGATGATGATCTGAACTTCGAGGAAGATGATGAGATGGCAGCAGTGATGGGATTCTCAGGGTTTGGCTCTTCCAAGAAGGGCCACTGAACTATTCTTGTTTCAGTACTGACAAACACATCCGCCTCCTGGCTGATTCCTTTATTAACCAGATGTTTCTTAATCCCTTTTACAACAAAAGTGGATGCTCCTCGAACCAGCCTCAGACagttgaaagaaaatgtccGGCACTGAGCTCAGTTAAATCAGTGGGGCAAAGCACAGGATTACTGAACTGAACTTGTTGGTCCAAAGTCTACtgaactctttttttttttttttaaaggaaaaaagatCCACATTCCTCAAAAACTAGCAactaaactttatttaaaaaacaaactgaagtcgttgttttaatttgttttgtatttattccctTCTCAGTCATGCTGGCTGAAATATAATTGATGAACCAATGCAAGAATAGTGATCATCCCAGTGCAGACACAGATTTTCTAATACTGTACAATCCCTGTGTACGCAATTTGAAATGATAGAAGATCTCTGCTGGAAGGCATTAGTTTCCACATGGGTGGATGTTctgaaaaacagacaattaaAGGAATTAATAATTTTACTCCGTGTCTGCAGGGTTTATACGTTTTCAAATAAAgtttaattctttaaaaataccaGGTTTTTGTCTTGCTGAGAAACATAAAAGGCTCGGATGATGTTCTGAAATTGAACACGGCATGTGTTGGTCTGTCTACAACAGGTCTCCTAAAAAGGGTGTGCAGTGTCGAGAGGCCTGTGCTGTTTTCTTCTATTTAAGTTTAAAGGTCATAGTTGTGGAGCTTTCTCTTAAAATTggattttaaagttgttttttagGAATCTGAAGTTGAGAGGGTCACTTTCATTTTGGAGAAAACCTTGTACTGTAGCAATTGGCACAGCTTATTAAAATTCAGAGAATATTAGGTCTTGCAATAATCGCAAGGCTTTTAAGTACTGTGTCCCTTCCCTACGTTTACAGAAAGCCGGAGGTCTACAGTTCTGGTCCTCCATAGTAAAAGTGGCATGTTTATAGATAGATTTAAGAGATACATACATTGTTTACGAGTACTAATCAAGAAAACTTTGTACTATTATGTCATTTGTGGCTTTCCTGGAATGAAGCCCAGATAATTTAGCTCTTCGTGACTTGATATTCAGATCACTACTCTACATTAAGTGTTTTGAGCTGAGTGCATTCTTTAGCAGTGCAGCAGCTTCCAAATAATGCATAAACTTTCCAATCAGATGTGTAGAAGTGACCTCCTTACTTAGTATCACTTCTACCACTTATTGCCCCACTCTGGAACGTTTTGTAccattttatatgtttatatagtAGGGACATCTGAAAATTGAATGAAGTCAATTCCACATAATAAGGTTATTTCAAATTTTACTTTCTGGGTTTATCTGTGAAAAATAAGCCCCCCATGTATGTGTGTCATTGGTGAGccactgtatatttttgtttttccattctgCTAGTTTCTTAATAAATAGATTTTCCATCTTTG

Function

GO: NA

KEGG:

id description
K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011359 True 1817 mRNA 0.39 4 19914612 19919189

Neighbor

gene id symbol gene type direction distance location
AMCG00011360 hars,LOC106611772 coding upstream 5019 19902161 ~ 19909593 (+)
AMCG00011358 LOC106603042,LOC107757604 coding upstream 16354 19889328 ~ 19898258 (+)
AMCG00011353 ik,LOC107692978,LOC107661680 coding upstream 26982 19842173 ~ 19887630 (+)
AMCG00011352 NA coding upstream 285186 19619982 ~ 19629426 (+)
AMCG00011351 NA coding upstream 305587 19601365 ~ 19609025 (+)
AMCG00011361 NA coding downstream 35431 19954620 ~ 19955087 (+)
AMCG00011363 NA coding downstream 37283 19956472 ~ 19957634 (+)
AMCG00011364 NA coding downstream 68060 19987249 ~ 19995970 (+)
AMCG00011373 NA coding downstream 819193 20738382 ~ 20739024 (+)
AMCG00011374 NA coding downstream 1035605 20954794 ~ 20958447 (+)
G106071 NA non-coding upstream 111137 19803171 ~ 19803475 (+)
G106022 NA non-coding upstream 325639 19588193 ~ 19588973 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 1297547 18616850 ~ 18617065 (+)
G105811 NA non-coding upstream 1666844 18175355 ~ 18247768 (+)
G105794 NA non-coding upstream 1881587 18032755 ~ 18033025 (+)
G106134 NA non-coding downstream 37816 19957005 ~ 19995987 (+)
G106138 NA non-coding downstream 59058 19978247 ~ 20014348 (+)
G106277 NA non-coding downstream 696249 20615438 ~ 20615641 (+)
G106298 NA non-coding downstream 988261 20907450 ~ 20907653 (+)
G106310 NA non-coding downstream 1033033 20952222 ~ 20952712 (+)
G105916 NA other upstream 692191 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 797243 19107273 ~ 19117369 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 2126562 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 2932371 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 3804231 16105586 ~ 16110381 (+)
G106139 LOC108275110 other downstream 176040 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 376822 20296011 ~ 20339325 (+)
G106242 NA other downstream 442019 20361208 ~ 20367223 (+)
G106613 NA other downstream 3422119 23341308 ~ 23341765 (+)
G106618 NA other downstream 3436873 23356062 ~ 23356559 (+)

Expression


Co-expression Network