Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00011351 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 19601365 ~ 19609025 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0001706 | endoderm formation | biological_process |
| GO:0031016 | pancreas development | biological_process |
| GO:0048546 | digestive tract morphogenesis | biological_process |
| GO:0050673 | epithelial cell proliferation | biological_process |
| GO:0045893 | positive regulation of transcription, DNA-templated | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0030855 | epithelial cell differentiation | biological_process |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00011351 | True | 612 | mRNA | 0.57 | 3 | 19601365 | 19609025 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011347 | NA | coding | upstream | 102160 | 19485659 ~ 19499205 (+) |
| AMCG00011346 | NA | coding | upstream | 117219 | 19480738 ~ 19484146 (+) |
| AMCG00011339 | LOC107748112,LOC107588766,LOC107590070 | coding | upstream | 125489 | 19451015 ~ 19475876 (+) |
| AMCG00011342 | NA | coding | upstream | 163161 | 19434328 ~ 19438204 (+) |
| AMCG00011341 | NA | coding | upstream | 173808 | 19422459 ~ 19427557 (+) |
| AMCG00011352 | NA | coding | downstream | 10957 | 19619982 ~ 19629426 (+) |
| AMCG00011353 | ik,LOC107692978,LOC107661680 | coding | downstream | 233148 | 19842173 ~ 19887630 (+) |
| AMCG00011358 | LOC106603042,LOC107757604 | coding | downstream | 280303 | 19889328 ~ 19898258 (+) |
| AMCG00011360 | hars,LOC106611772 | coding | downstream | 293136 | 19902161 ~ 19909593 (+) |
| AMCG00011359 | NA | coding | downstream | 305587 | 19914612 ~ 19919189 (+) |
| G106022 | NA | non-coding | upstream | 12392 | 19588193 ~ 19588973 (+) |
| G105858 | LOC105030512,LOC106609167,LOC106569888 | non-coding | upstream | 984300 | 18616850 ~ 18617065 (+) |
| G105811 | NA | non-coding | upstream | 1353597 | 18175355 ~ 18247768 (+) |
| G105794 | NA | non-coding | upstream | 1568340 | 18032755 ~ 18033025 (+) |
| G105792 | NA | non-coding | upstream | 1601022 | 17999636 ~ 18000343 (+) |
| G106071 | NA | non-coding | downstream | 194146 | 19803171 ~ 19803475 (+) |
| G106134 | NA | non-coding | downstream | 347980 | 19957005 ~ 19995987 (+) |
| G106138 | NA | non-coding | downstream | 369222 | 19978247 ~ 20014348 (+) |
| G106277 | NA | non-coding | downstream | 1006413 | 20615438 ~ 20615641 (+) |
| G106298 | NA | non-coding | downstream | 1298425 | 20907450 ~ 20907653 (+) |
| G105916 | NA | other | upstream | 378944 | 19222055 ~ 19222421 (+) |
| AMCG00011328 | NA | other | upstream | 483996 | 19107273 ~ 19117369 (+) |
| G105778 | LOC105024433,LOC107752029,LOC107743918,LOC106604409 | other | upstream | 1813315 | 17784163 ~ 17788050 (+) |
| AMCG00011293 | plac8l1 | other | upstream | 2619124 | 16978492 ~ 16982241 (+) |
| AMCG00011268 | NA | other | upstream | 3490984 | 16105586 ~ 16110381 (+) |
| G106139 | LOC108275110 | other | downstream | 486204 | 20095229 ~ 20162966 (+) |
| AMCG00011365 | LOC108438827,LOC108243066,LOC107376386 | other | downstream | 686986 | 20296011 ~ 20339325 (+) |
| G106242 | NA | other | downstream | 752183 | 20361208 ~ 20367223 (+) |
| G106613 | NA | other | downstream | 3732283 | 23341308 ~ 23341765 (+) |
| G106618 | NA | other | downstream | 3747037 | 23356062 ~ 23356559 (+) |
