AMCG00011342


Basic Information

Item Value
gene id AMCG00011342
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19434328 ~ 19438204 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011342
ATGCAGAAAGCAACAACTGGGAATCTGATCAGCAGGTGCAGCTCCGTGTTTTCAGTTCATGTTGAGAAGAGACTGCAGAATGGCAGTGAAAGTCCAGAGTTTTGTCGCTCCAGATTGCAGCTATTTGATCTTGCTGGTGGGGCATACAGGGAAGATGTCAATGGGGTCAGCCCCTTGTTGAAAGTCCTAGAGCAGGCTGAAGGACTGCTGCCCGTCCTGTTGACTGAGGCGCTCCGAGGAAACGGCCTGGTGGATGAGGAAACCCCCAGGGCTCTGGCACTGGCTCAGCAGCTGAGGAGGCTGAGGACCAGGGTGTCTCCCGGCCACTGGTGCCCCCAGAGGTCTGCTCACCGGCTACGGTCACTCATTTTGCAGCAGAGGAACAAGATAATCGCTCAGGAAAACAGTGGAGAACAAGAAACACGAGAGCTGGCTGAGCTCGTTAAGGCCCTGCAGGTGTATGGAGGGGAACTACAGCCAAACCAGTATCTGAGAATACAGAGCATTGTTAAAAACCAGAGCtgggagaagaagagagaaagatcaaaagagaatgaagaaaaaataaagGCTTATGCAGCCAGCAGCCCAGCCTACACTGCTCCCCAGCTGAGGGAGATGCAGGAGAGGCTCAGATACTTTCAGGAGCAACTGAAGAAGGAGATGGAGGAACACTTGAAAGATGGGAAAGTCTGTGTTGACAAGAATCAGAAGAGCGTGAGCAGGATTGAGCAGCTGAAGGAAGCCATCGCCGAGGAAGAGAGGAAGCTGAAAAATGTCATGCAGGAATCAGAGCAACTACAGCACCCCACTGGTCAGGCAAAAGATACTTTGTCCCAGGCTGCTGATGTGGAGCTGGAATATACAACAGCTCTGaacaggaggaggaggctgaAGGAACAGCACAGTGCTCTGATTCAGGAGGAACTTCTGAAGATGGAACAGGAACAAGAGACTGAGAAGGGCGAGGGGCAGGTGGCAGAGCTCTGGAGACTCGGCAGAGAGCGGGAGATCCTGGTGCTGCAGCTGGAGTCGCTGCGGAGGGAGAAGGCCGAGGCCGAGAGGGACCTGGAGGCCCAGCATCACAGACACACCCAGGAGCTGGCCACACTGCGGGCAGAAAGCCTACAGGTTTTCCGAGCTTTCCGGGAAGTGTttgaggaacagagagagaccCTAGAACAGCGCTACCGTGGCCTGCTTGTCGAGGCCATTCGGGACGCAGTATATCTCTCAGCCAAGAACCAGCAGCTGGAGGTAGAGAACAGCCAGCTCCAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011342 True 1281 mRNA 0.54 10 19434328 19438204

Neighbor

gene id symbol gene type direction distance location
AMCG00011341 NA coding upstream 6771 19422459 ~ 19427557 (+)
AMCG00011337 rps14,RPS14,LOC100194652 coding upstream 20047 19410611 ~ 19414281 (+)
AMCG00011340 ndst1,LOC108278613,LOC108431357 coding upstream 37564 19372447 ~ 19396764 (+)
AMCG00011338 NA coding upstream 120963 19311307 ~ 19313365 (+)
AMCG00011344 LOC101481134 coding upstream 145133 19286626 ~ 19289195 (+)
AMCG00011339 LOC107748112,LOC107588766,LOC107590070 coding downstream 12811 19451015 ~ 19475876 (+)
AMCG00011346 NA coding downstream 42534 19480738 ~ 19484146 (+)
AMCG00011347 NA coding downstream 47455 19485659 ~ 19499205 (+)
AMCG00011351 NA coding downstream 163161 19601365 ~ 19609025 (+)
AMCG00011352 NA coding downstream 181778 19619982 ~ 19629426 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 817263 18616850 ~ 18617065 (+)
G105811 NA non-coding upstream 1186560 18175355 ~ 18247768 (+)
G105794 NA non-coding upstream 1401303 18032755 ~ 18033025 (+)
G105792 NA non-coding upstream 1433985 17999636 ~ 18000343 (+)
G105776 phykpl,LOC100691570 non-coding upstream 1666107 17765891 ~ 17768221 (+)
G106022 NA non-coding downstream 149989 19588193 ~ 19588973 (+)
G106071 NA non-coding downstream 364967 19803171 ~ 19803475 (+)
G106134 NA non-coding downstream 518801 19957005 ~ 19995987 (+)
G106138 NA non-coding downstream 540043 19978247 ~ 20014348 (+)
G106277 NA non-coding downstream 1177234 20615438 ~ 20615641 (+)
G105916 NA other upstream 211907 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 316959 19107273 ~ 19117369 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 1646278 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 2452087 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 3323947 16105586 ~ 16110381 (+)
G106139 LOC108275110 other downstream 657025 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 857807 20296011 ~ 20339325 (+)
G106242 NA other downstream 923004 20361208 ~ 20367223 (+)
G106613 NA other downstream 3903104 23341308 ~ 23341765 (+)
G106618 NA other downstream 3917858 23356062 ~ 23356559 (+)

Expression


Co-expression Network