AMCG00011816


Basic Information

Item Value
gene id AMCG00011816
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5353856 ~ 5361606 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011816
ATCACAGAACTTCCTCAAAACAGACAAGTTAATTGTGGGAACAATGTAATCTGTCAGACAAAgctgattttaaaaagtttctCCAGCGCGGTTGACACACAGTTCAGTGCAAGATAATGGATGTCTTGTACGCCAAAGTGAATTTTTCCAATAAGAAGGGGAAAGAGCGCAAGCCGGGTGACACAGCAGTGCGTGTGTTCAGATTATGTGTATCAATTGtgaacaattaataaatacaacttttacaTCTCTTACAGACAATACTCCCCGTAAGACAGCTGAGGGTCAAGCTGCCTCCAGACCTTATCTGACAATATCGCTTGCAGTCCTGTGTTGTTTATTGGCAGCGATAATTATTGCTCTTGGTGTATGGACTACCAAAAGTGCAGACAAATGGAGAAAACCCAGAATGTTTTGTATCGCAtctccagatgaaaaaaaacaaaatgtgaagacATGCCCTGAGAAACTACAACATGGAATGACTGGATGTTTCTGTCGGAAGCCTTGGATGCCATTTCATAACAGATGTTACTTCTTCTCAACTGATGAGATGAACTGGACCAGCAGTCGTGATAACTGTTCATCAATGCAAGGACACCTTGTCATCATAGAGACTGCAGAGGAGCAGACCGGGTCTTCTGTAGTGGGCAATATGAAGCAGCAGAGTGAGGTGAAGGCAGGGCCAGATATCCTACAGAAGAAGAgcagagagaatgagagagggCGGCTGGAGCAGCGAAGACAACGAGGACGCCGTATAGTTAGCCCTAGTTCGAGTTTCCCTCGCCAGTGGCCTGTGGAGAATATTGACCGTGACCATACCAGGAGGGAGGAAATGCAGAATACGGAGTGGTACGCGACTGTCTCCTGGCCAGGGAAAGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011816 True 889 mRNA 0.45 6 5353856 5361606

Neighbor

gene id symbol gene type direction distance location
AMCG00011813 NA coding upstream 80176 5263900 ~ 5273680 (+)
AMCG00011808 NA coding upstream 101200 5222497 ~ 5252656 (+)
AMCG00011807 NA coding upstream 188304 5163230 ~ 5165552 (+)
AMCG00011805 NA coding upstream 386159 4964661 ~ 4967697 (+)
AMCG00011804 NA coding upstream 472822 4876935 ~ 4881034 (+)
AMCG00011814 NA coding downstream 42225 5403831 ~ 5410152 (+)
AMCG00011815 NA coding downstream 55785 5417391 ~ 5426066 (+)
AMCG00011819 NA coding downstream 77355 5438961 ~ 5447855 (+)
AMCG00011817 NA coding downstream 110633 5472239 ~ 5476759 (+)
AMCG00011820 NA coding downstream 121904 5483510 ~ 5522364 (+)
G132820 NA non-coding upstream 287395 5021199 ~ 5066461 (+)
G132818 NA non-coding upstream 334468 5019001 ~ 5019388 (+)
G132817 NA non-coding upstream 336316 5017310 ~ 5017540 (+)
G132781 NA non-coding upstream 351135 5002394 ~ 5002721 (+)
G132758 NA non-coding upstream 502815 4850606 ~ 4851041 (+)
G132993 NA non-coding downstream 318862 5680468 ~ 5681398 (+)
G132997 NA non-coding downstream 320467 5682073 ~ 5682808 (+)
G133014 NA non-coding downstream 410457 5772063 ~ 5799356 (+)
G133060 NA non-coding downstream 472209 5833815 ~ 5834041 (+)
G133066 NA non-coding downstream 482658 5844264 ~ 5845059 (+)
AMCG00011806 NA other upstream 233758 5115090 ~ 5120098 (+)
AMCG00011771 NA other upstream 1376194 3903675 ~ 3977662 (+)
AMCG00011770 NA other upstream 1456260 3892381 ~ 3897596 (+)
G132271 NA other upstream 2149259 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 2252719 3078417 ~ 3101137 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 398252 5759858 ~ 5761248 (+)
G133059 NA other downstream 467195 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 525311 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 531918 5893524 ~ 5907174 (+)
AMCG00011873 NA other downstream 723246 6084852 ~ 6102011 (+)

Expression


Co-expression Network