AMCG00011813


Basic Information

Item Value
gene id AMCG00011813
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5263900 ~ 5273680 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011813
GTGCATGCAAAGGTGCCATGTTGCTAGGTAAATAGTGAGAATGGAAATATTGTAGCTAACTAGTCAGGTGTCAGGTTTCCTCTTGTCTACGGGTAGCAGCCTTCCCtttaacacacagcacaacgACGGCATTCAGAGCACAGGAGCGAATTCCCAGCACTCCCAGTCAAGCCTCTGGTGTCACCTTTCTGTGAGACAAACAGGTTCAGATATGTCCATCCAACCTGTCGTGATTCAGCCAGGACTGGTCTCCGGGCAAATGAAGACCAATGATTGGAGATCAGGGATGTGTGACTGCTGTGATGACATGGGCATCTGTTGCTGTGGCTTCTGGTGTCTGCCCTGCTTAATGTGCAAGACGACTAGTGAATTCGGGGAATGCCTctgtctccccctgctggaCCCGTGGTTTTGCATGGCCGTCACCTGCTCTGTGGGAATGATCCCTCCCATTGCCCTCTCCATGCGCAGCACCATCCGTGAGCGCTACAACATAAAGGGTACAATATGTGGCGACTGCTGCGTGGTGACCTGCTGCAACTCCTGCGCCTGGTGCCAGATGGCCAGAGAGTTGAAACACCACAAGCAGCCCCTGATTATCAGCGCCCCCCAAGCCATGCCAATGGGTCCCTCCTCGGGGGGTTACCCacaaattcaaacacaataCGGGTCCCCTGGACCCTACAATATCATGCCACAATAGAGCCTCACAGTGCTCCAGTCAACATCAACAAAGAGATGGCGAGATATAAAGAGATATTAATTCAGTAGTGCCTGATCAAATTTATAATCAGTTGAGACATGTAGGATTGTTTGGGAGGAAAAAGATAATGAATCACAGAAtccatacatattttatgaatcacttatttttttacttaggAACTCTAgattcatattatatttatattaatttattcttacATAGCCCATTTACGGTGTATATATGTGGATGGGGTGGGGTTAATTTGTACcctatattttcaacatattaagtaaatatttggATTACAGGCACAAATCTGGATAAAGTAaatcccatatattttaaatatacaaaaagtaaaCAGTTTTGctataagaataatataatatactgcgttttaaaaatatttggttgattaatatgcaatttttttaattattaatttgctttaaacattttctcagtTGTTCACATATTCTGTCTCCTGCTGCTATTGTAGTCCTGCAGAGGGCGAAACCCACCCTGCTGTTATATACTGTGCTGGGGGTGAATTCCTCTCTGTGTGAGAGCTAATAACATAGAGACCGCCATGTTATTTCATATCATGCAACTCCATGGTCCTCCTTAAATTCATCTTATctttgtacatatttgtatCTCAAAGGCTGACTGAGCGTGACACTAATCTACACATATACACGCAGCCCATTTTGatacttcagttttttattgtctatttgttcttcttccaactaaatatgtaataaatgtatattgacaGAAATGGCCCTGCATTTCCAATCAACTCTTGTGgaactgtgaaaaaaaataaaaaTTCTGTTTGCATGATTAATAACTGTACAATTACTgatgtttatattaatgtcaGAAAAATATTCTCCTTCTGGGCTTCATATACATGGATATGCTGTGACTGTTAATATAGGGTCATATGAGCTAAAACTCTGGAAGTTTTACTGTCAgtagattgtatttttcaatagCAAATACTAATGAGCTAGTACttgtgtgtataaaaagcaTGTATTTAAAGTCCTAATTTGAGGTTACGAATTGTGGCAAACAGAAGCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011813 True 1800 mRNA 0.40 6 5263900 5273680

Neighbor

gene id symbol gene type direction distance location
AMCG00011808 NA coding upstream 11244 5222497 ~ 5252656 (+)
AMCG00011807 NA coding upstream 98348 5163230 ~ 5165552 (+)
AMCG00011805 NA coding upstream 296203 4964661 ~ 4967697 (+)
AMCG00011804 NA coding upstream 382866 4876935 ~ 4881034 (+)
AMCG00011803 NA coding upstream 432675 4828434 ~ 4831225 (+)
AMCG00011816 NA coding downstream 80176 5353856 ~ 5361606 (+)
AMCG00011814 NA coding downstream 130151 5403831 ~ 5410152 (+)
AMCG00011815 NA coding downstream 143711 5417391 ~ 5426066 (+)
AMCG00011819 NA coding downstream 165281 5438961 ~ 5447855 (+)
AMCG00011817 NA coding downstream 198559 5472239 ~ 5476759 (+)
G132820 NA non-coding upstream 197439 5021199 ~ 5066461 (+)
G132818 NA non-coding upstream 244512 5019001 ~ 5019388 (+)
G132817 NA non-coding upstream 246360 5017310 ~ 5017540 (+)
G132781 NA non-coding upstream 261179 5002394 ~ 5002721 (+)
G132758 NA non-coding upstream 412859 4850606 ~ 4851041 (+)
G132993 NA non-coding downstream 406788 5680468 ~ 5681398 (+)
G132997 NA non-coding downstream 408393 5682073 ~ 5682808 (+)
G133014 NA non-coding downstream 498383 5772063 ~ 5799356 (+)
G133060 NA non-coding downstream 560135 5833815 ~ 5834041 (+)
G133066 NA non-coding downstream 570584 5844264 ~ 5845059 (+)
AMCG00011806 NA other upstream 143802 5115090 ~ 5120098 (+)
AMCG00011771 NA other upstream 1286238 3903675 ~ 3977662 (+)
AMCG00011770 NA other upstream 1366304 3892381 ~ 3897596 (+)
G132271 NA other upstream 2059303 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 2162763 3078417 ~ 3101137 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 486178 5759858 ~ 5761248 (+)
G133059 NA other downstream 555121 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 613237 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 619844 5893524 ~ 5907174 (+)
AMCG00011873 NA other downstream 811172 6084852 ~ 6102011 (+)

Expression


Co-expression Network