AMCG00011874


Basic Information

Item Value
gene id AMCG00011874
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6170069 ~ 6170866 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011874
ATGATCAGAGCTGACATGGTGGTGCCCATCTACATCATCAACCTGCTCATCTCCGACCTCCTGCAGATCAGCGTGAGAGTTATCATGTTAATCATAATATTTATACttacacacagagagggattaTTGATTGCTTGGGCTATTTTGGAAAGTATCTTTTTCATGAGCCTGAGTGCCAGCATTGGGTTGATGCTGTGCATCGCCCTGGAGAGATACCTGGTGGTCGCCCATCCTCTGTGGTACCGGTACCACCGCAATGTCAGGCATGCCACACTGGTCTCTGTGGGAGTGTGGGTGTCGGTTGAGATACTTACTGCAGTTGTGAAGCCACTATATTTTATCCTTCACCTgcacaaacaaataatgataacaatCTTTGTACTCAGCCTCCTGCTGTTCCCTCttctcttgttcttcttcttctttgatACATGGAGAGCCATCGCCGGCGCCATCTCTGTACGAGACGCAGAGAAGAGTAGGATTGTGTGCATGCTGGCCCTCGTCCTGGGCACCTACACTGTGCTCTTCCTCCCATACTGCATAGTGAATTTAATGATATgctataataaaaatagaagtaTTGACATTGCTGAAACCATTAAAATTGCAATGGTGAATCTCAGTGTCCTTGTGGACCCAGTGCTGTACATCCTCCTCAGGTCTGATGTCAGGAGCACACTGGTCTTTATCCCCTGCTGTCAGAGGCTGTTCACGCTgaccaactgctggacacccaGAGCTGAGCAGGAGACAGAGGATACAGCCACTGTGTCCTCTACTGTCACCAGTgtctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011874 True 798 mRNA 0.48 1 6170069 6170866

Neighbor

gene id symbol gene type direction distance location
AMCG00011872 NA coding upstream 21472 6147632 ~ 6148597 (+)
AMCG00011865 NA coding upstream 116064 6053574 ~ 6054005 (+)
AMCG00011863 NA coding upstream 119216 6030099 ~ 6050853 (+)
AMCG00011861 NA coding upstream 148373 6018215 ~ 6021696 (+)
AMCG00011864 NA coding upstream 156959 6003677 ~ 6013110 (+)
AMCG00011875 NA coding downstream 71124 6241990 ~ 6243488 (+)
AMCG00011890 NA coding downstream 150136 6321002 ~ 6329996 (+)
AMCG00011891 NA coding downstream 161585 6332451 ~ 6347406 (+)
AMCG00011892 NA coding downstream 180728 6351594 ~ 6360880 (+)
AMCG00011893 NA coding downstream 193307 6364173 ~ 6368311 (+)
G133145 NA non-coding upstream 92684 6067574 ~ 6077385 (+)
G133129 NA non-coding upstream 134083 5992317 ~ 6035986 (+)
G133115 NA non-coding upstream 162481 5932822 ~ 6007588 (+)
G133132 NA non-coding upstream 170838 5998609 ~ 5999231 (+)
G133108 NA non-coding upstream 267266 5901703 ~ 5902803 (+)
G133248 NA non-coding downstream 53440 6224306 ~ 6224519 (+)
G133264 NA non-coding downstream 151900 6322766 ~ 6347706 (+)
G133350 NA non-coding downstream 395993 6566859 ~ 6578010 (+)
G133354 NA non-coding downstream 418550 6589416 ~ 6589658 (+)
G133440 NA non-coding downstream 505650 6676516 ~ 6717923 (+)
AMCG00011873 NA other upstream 68058 6084852 ~ 6102011 (+)
AMCG00011853 zfhx2,LOC108245441 other upstream 262895 5893524 ~ 5907174 (+)
AMCG00011837 NA other upstream 281185 5886917 ~ 5888884 (+)
G133059 NA other upstream 340537 5828801 ~ 5829532 (+)
AMCG00011830 vmhcl,LOC107560354 other upstream 408821 5759858 ~ 5761248 (+)
AMCG00011876 NA other downstream 85084 6255950 ~ 6260389 (+)
G133327 NA other downstream 313081 6483947 ~ 6489208 (+)
AMCG00011909 ccnb1ip1 other downstream 374522 6545388 ~ 6560662 (+)
AMCG00011917 NA other downstream 474010 6644876 ~ 6653731 (+)
AMCG00011948 NA other downstream 965002 7135868 ~ 7140132 (+)

Expression


Co-expression Network