Gene
RNA
| Item | Value |
|---|---|
| gene id | G133115 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 5932822 ~ 6007588 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| HORMA domain-containing protein 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU166918 | True | 195 | lncRNA | 0.45 | 3 | 5932822 | 6007588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011855 | NA | coding | upstream | 21468 | 5910481 ~ 5911354 (+) |
| AMCG00011834 | NA | coding | upstream | 49384 | 5871969 ~ 5883438 (+) |
| AMCG00011836 | dcaf11 | coding | upstream | 82814 | 5846142 ~ 5850008 (+) |
| AMCG00011835 | psme1,LOC107691441 | coding | upstream | 90009 | 5835610 ~ 5842813 (+) |
| AMCG00011839 | NA | coding | upstream | 107956 | 5818212 ~ 5824866 (+) |
| AMCG00011861 | NA | coding | downstream | 10627 | 6018215 ~ 6021696 (+) |
| AMCG00011863 | NA | coding | downstream | 22511 | 6030099 ~ 6050853 (+) |
| AMCG00011865 | NA | coding | downstream | 45986 | 6053574 ~ 6054005 (+) |
| AMCG00011872 | NA | coding | downstream | 140044 | 6147632 ~ 6148597 (+) |
| AMCG00011874 | NA | coding | downstream | 162481 | 6170069 ~ 6170866 (+) |
| G133108 | NA | non-coding | upstream | 30019 | 5901703 ~ 5902803 (+) |
| G133090 | NA | non-coding | upstream | 62666 | 5869945 ~ 5870156 (+) |
| G133077 | NA | non-coding | upstream | 78113 | 5854488 ~ 5854709 (+) |
| G133074 | NA | non-coding | upstream | 80097 | 5851874 ~ 5852725 (+) |
| G133066 | NA | non-coding | upstream | 87763 | 5844264 ~ 5845059 (+) |
| G133145 | NA | non-coding | downstream | 59986 | 6067574 ~ 6077385 (+) |
| G133248 | NA | non-coding | downstream | 216718 | 6224306 ~ 6224519 (+) |
| G133264 | NA | non-coding | downstream | 315178 | 6322766 ~ 6347706 (+) |
| G133350 | NA | non-coding | downstream | 559271 | 6566859 ~ 6578010 (+) |
| G133354 | NA | non-coding | downstream | 581828 | 6589416 ~ 6589658 (+) |
| AMCG00011853 | zfhx2,LOC108245441 | other | upstream | 25648 | 5893524 ~ 5907174 (+) |
| AMCG00011837 | NA | other | upstream | 43938 | 5886917 ~ 5888884 (+) |
| G133059 | NA | other | upstream | 103290 | 5828801 ~ 5829532 (+) |
| AMCG00011830 | vmhcl,LOC107560354 | other | upstream | 171574 | 5759858 ~ 5761248 (+) |
| AMCG00011806 | NA | other | upstream | 812724 | 5115090 ~ 5120098 (+) |
| AMCG00011873 | NA | other | downstream | 77264 | 6084852 ~ 6102011 (+) |
| AMCG00011876 | NA | other | downstream | 248362 | 6255950 ~ 6260389 (+) |
| G133327 | NA | other | downstream | 476359 | 6483947 ~ 6489208 (+) |
| AMCG00011909 | ccnb1ip1 | other | downstream | 537800 | 6545388 ~ 6560662 (+) |
| AMCG00011917 | NA | other | downstream | 637288 | 6644876 ~ 6653731 (+) |
