Gene
RNA
| Item | Value |
|---|---|
| gene id | G133090 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 5869945 ~ 5870156 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU166889 | True | 212 | lncRNA | 0.39 | 1 | 5869945 | 5870156 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011836 | dcaf11 | coding | upstream | 19937 | 5846142 ~ 5850008 (+) |
| AMCG00011835 | psme1,LOC107691441 | coding | upstream | 27132 | 5835610 ~ 5842813 (+) |
| AMCG00011839 | NA | coding | upstream | 45079 | 5818212 ~ 5824866 (+) |
| AMCG00011838 | LOC101484004,LOC103375112,LOC102294892 | coding | upstream | 77668 | 5788969 ~ 5792277 (+) |
| AMCG00011829 | NA | coding | upstream | 153799 | 5715341 ~ 5716146 (+) |
| AMCG00011834 | NA | coding | downstream | 1813 | 5871969 ~ 5883438 (+) |
| AMCG00011855 | NA | coding | downstream | 40325 | 5910481 ~ 5911354 (+) |
| AMCG00011852 | NA | coding | downstream | 54751 | 5924907 ~ 5936489 (+) |
| AMCG00011851 | NA | coding | downstream | 81556 | 5951712 ~ 5973380 (+) |
| AMCG00011854 | NA | coding | downstream | 103941 | 5974097 ~ 5980285 (+) |
| G133077 | NA | non-coding | upstream | 15236 | 5854488 ~ 5854709 (+) |
| G133074 | NA | non-coding | upstream | 17220 | 5851874 ~ 5852725 (+) |
| G133066 | NA | non-coding | upstream | 24886 | 5844264 ~ 5845059 (+) |
| G133060 | NA | non-coding | upstream | 35904 | 5833815 ~ 5834041 (+) |
| G133014 | NA | non-coding | upstream | 70589 | 5772063 ~ 5799356 (+) |
| G133108 | NA | non-coding | downstream | 31547 | 5901703 ~ 5902803 (+) |
| G133115 | NA | non-coding | downstream | 62666 | 5932822 ~ 6007588 (+) |
| G133129 | NA | non-coding | downstream | 122161 | 5992317 ~ 6035986 (+) |
| G133132 | NA | non-coding | downstream | 128453 | 5998609 ~ 5999231 (+) |
| G133145 | NA | non-coding | downstream | 197418 | 6067574 ~ 6077385 (+) |
| G133059 | NA | other | upstream | 40413 | 5828801 ~ 5829532 (+) |
| AMCG00011830 | vmhcl,LOC107560354 | other | upstream | 108697 | 5759858 ~ 5761248 (+) |
| AMCG00011806 | NA | other | upstream | 749847 | 5115090 ~ 5120098 (+) |
| AMCG00011771 | NA | other | upstream | 1892283 | 3903675 ~ 3977662 (+) |
| AMCG00011770 | NA | other | upstream | 1972349 | 3892381 ~ 3897596 (+) |
| AMCG00011837 | NA | other | downstream | 16761 | 5886917 ~ 5888884 (+) |
| AMCG00011853 | zfhx2,LOC108245441 | other | downstream | 23368 | 5893524 ~ 5907174 (+) |
| AMCG00011873 | NA | other | downstream | 214696 | 6084852 ~ 6102011 (+) |
| AMCG00011876 | NA | other | downstream | 385794 | 6255950 ~ 6260389 (+) |
| G133327 | NA | other | downstream | 613791 | 6483947 ~ 6489208 (+) |
