G133074


Basic Information

Item Value
gene id G133074
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5851874 ~ 5852725 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU166873
GCAGGGGCCTGAGCATGTGTCTTTTTCTGTAACtccccctgagagagagatagagcgagagagagagggagggttaCATATTACTTTTAATAACTTCCTCAGTGtcggacagagagagagagagagagagagagagagcgagagcgtgTCCTTTCCTAAACGTCATTAGAAACTTCTGTGCATTATTTGGtacaaggagggagagagagaaagagaagtagagaaaaagggggaaaaaaagagggagagagggaggggtggtCAAGGGCAAGGTGgtaaacagagagagggattgacggagagaggcagagacacagagagccCTCTGCTCTCACAGGACGCTTGAGAGTCTGCATGGTATAGACAGAacgtgagacagagagagagagagagaattctcCCTTGATCTTCACTGGATCCCCACCAAACCGCTCACACTGGGCTTGTTCTCGCTGGATCGCTACTTGGCAGCACAGAGCCGGGCCGGGCCGGCGCAGTGTAATAGACTGGTGAAGTGCTGCACTCCAGTCCAGTCCGGATGATTCTGTACACGGTTCTGGCGCTGGTGACGGACGGAGCCGCCTACCTCCTTGGCCATGCGTCCTTCCGCCGGCACTTCCACCTGATGCTGTCGGCGCTGGTTCTGCTGGGCCCGGCGCTGAGCCTGTGGGCGTCTCAGCACAGCGTGTTCGCCAACAAGAGGCATTACCTGTACCGGTGAGTCACCGACACCCGGACACACGGACACCCTGactctctgactgactgacacactgcctgactgtctccctctctccatccctctacccctctctccttccctcaacccccctccctctatctccccctccc

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU166873 True 852 lncRNA 0.56 1 5851874 5852725

Neighbor

gene id symbol gene type direction distance location
AMCG00011836 dcaf11 coding upstream 1866 5846142 ~ 5850008 (+)
AMCG00011835 psme1,LOC107691441 coding upstream 9061 5835610 ~ 5842813 (+)
AMCG00011839 NA coding upstream 27008 5818212 ~ 5824866 (+)
AMCG00011838 LOC101484004,LOC103375112,LOC102294892 coding upstream 59597 5788969 ~ 5792277 (+)
AMCG00011829 NA coding upstream 135728 5715341 ~ 5716146 (+)
AMCG00011834 NA coding downstream 19244 5871969 ~ 5883438 (+)
AMCG00011855 NA coding downstream 57756 5910481 ~ 5911354 (+)
AMCG00011852 NA coding downstream 72182 5924907 ~ 5936489 (+)
AMCG00011851 NA coding downstream 98987 5951712 ~ 5973380 (+)
AMCG00011854 NA coding downstream 121372 5974097 ~ 5980285 (+)
G133066 NA non-coding upstream 6815 5844264 ~ 5845059 (+)
G133060 NA non-coding upstream 17833 5833815 ~ 5834041 (+)
G133014 NA non-coding upstream 52518 5772063 ~ 5799356 (+)
G132997 NA non-coding upstream 169066 5682073 ~ 5682808 (+)
G132993 NA non-coding upstream 170476 5680468 ~ 5681398 (+)
G133077 NA non-coding downstream 1763 5854488 ~ 5854709 (+)
G133090 NA non-coding downstream 17220 5869945 ~ 5870156 (+)
G133108 NA non-coding downstream 48978 5901703 ~ 5902803 (+)
G133115 NA non-coding downstream 80097 5932822 ~ 6007588 (+)
G133129 NA non-coding downstream 139592 5992317 ~ 6035986 (+)
G133059 NA other upstream 22342 5828801 ~ 5829532 (+)
AMCG00011830 vmhcl,LOC107560354 other upstream 90626 5759858 ~ 5761248 (+)
AMCG00011806 NA other upstream 731776 5115090 ~ 5120098 (+)
AMCG00011771 NA other upstream 1874212 3903675 ~ 3977662 (+)
AMCG00011770 NA other upstream 1954278 3892381 ~ 3897596 (+)
AMCG00011837 NA other downstream 34192 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 40799 5893524 ~ 5907174 (+)
AMCG00011873 NA other downstream 232127 6084852 ~ 6102011 (+)
AMCG00011876 NA other downstream 403225 6255950 ~ 6260389 (+)
G133327 NA other downstream 631222 6483947 ~ 6489208 (+)

Expression


Co-expression Network