G41096


Basic Information

Item Value
gene id G41096
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14735821 ~ 14736661 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51211
AGCAGCTCCCAATATCTGACATCAATACAAATTATGTCTTACAAGTTTCATTTCCTGTCATACACAATGTGTATGACTAAATGAGTGATTTATTTGACACTTAAAACACAGTGTAACACAATGCCAGTGCAGTCTGAGCCGCCTTGAATGTCTAATGCAGGGCGCACTGTTTAAGAACACTTCATCAGCTTTGACTGATGTGTCAGCATGGGCAGCTCAGTTAACCATGTCATCAGGTGCGTGGAGTAGCTGCAGCATTTAGCTGgttgtgtgattttgttttgtcaacaCAAGGAGCACCTCCAAAACTGCGGTCTGCCAGTGGGGGGACGCATGCGACTTTGTTCTTGGACCTCTCGTTTTCTCTCAAAAACCTCACAGTTTTATCGCCACAACACATTAAGTGAAACATGTTGCAGGCAGTGCTAATGTCCCATTTTACCCTAGACAACACAAGTAACAAATGACAGAACAATAGCCAGCCCAGTTcttcagaaaaaggaaaataatattgagaATGGCAAAAAAGACACTATATGGATTCAACACTGACATTTCCAGCAACTTAATAAGAATGCAGTAAGAACAATAATGGTGCAGCCATTGCACAGCCTCATCCTCCATTACATAACAGTCCCCATATCAGATTCATAAGGTATCTCTGCCTAGCTACCTTTGCCACTGTGAAATCTGTTACTGCATGTTCATCCTGCAACAGCCCAACAACCAACCACACAGTGAAACTGTGAAACAACCTACAGCAGTGTCGTCACACTGAGCTTTCAATGTAGGACAGCTGCTACAGTGAAGAgatggggttaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51211 True 841 lncRNA 0.42 1 14735821 14736661

Neighbor

gene id symbol gene type direction distance location
AMCG00012941 NA coding upstream 54174 14652844 ~ 14681647 (+)
AMCG00012942 NA coding upstream 155593 14574593 ~ 14580228 (+)
AMCG00012939 LOC103459300,LOC104941780 coding upstream 225332 14479076 ~ 14510489 (+)
AMCG00012936 NA coding upstream 284718 14433803 ~ 14451103 (+)
AMCG00012935 NA coding upstream 316563 14405558 ~ 14419258 (+)
AMCG00012947 NA coding downstream 43904 14780565 ~ 14793388 (+)
AMCG00012946 NA coding downstream 61051 14797712 ~ 14811683 (+)
AMCG00012945 NA coding downstream 97829 14834490 ~ 14851076 (+)
AMCG00012949 LOC108428177 coding downstream 142101 14878762 ~ 14922962 (+)
AMCG00012952 kcnd2,LOC108412901,LOC107658801,LOC107744998 coding downstream 238049 14974710 ~ 14975822 (+)
G41092 NA non-coding upstream 7372 14728182 ~ 14728449 (+)
G41084 NA non-coding upstream 30636 14704960 ~ 14705185 (+)
G41082 NA non-coding upstream 45147 14690110 ~ 14690674 (+)
G41075 NA non-coding upstream 58576 14675065 ~ 14677245 (+)
G41058 NA non-coding upstream 105211 14628583 ~ 14630610 (+)
G41158 NA non-coding downstream 189664 14926325 ~ 14955039 (+)
G41184 NA non-coding downstream 423775 15160436 ~ 15166469 (+)
G41225 NA non-coding downstream 500626 15237287 ~ 15285288 (+)
G41226 NA non-coding downstream 511717 15248378 ~ 15264573 (+)
G41230 NA non-coding downstream 548680 15285341 ~ 15287816 (+)
G41059 NA other upstream 102408 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 206015 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 302620 14428313 ~ 14433201 (+)
G40629 NA other upstream 2199892 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 2235419 12453239 ~ 12500402 (+)
AMCG00012954 NA other downstream 344758 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 561301 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 740518 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 829832 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 834245 15570906 ~ 15573468 (+)

Expression


Co-expression Network