AMCG00015353


Basic Information

Item Value
gene id AMCG00015353
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8201563 ~ 8202566 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015353
ATGATGCAGTTTTTGTTGCCGAGTCTCTGGGGGCGCCTTCCAGCTCGGTACAGCGCCTTGTGGAGGTGTGTGTGCTCGCCCGGTCGCTCCTCGGCTCTCCTGCCGGGGTGGAGCGCCCCCACGCCGCGGACGGAGCGGGCAGCACTCGGGGTAATTGCAGCCCGGTGCTACAGCCTCAGCCTGGCTCACGAGTGCCTGCACAgcattaataatcatattaactATACAAGTGTCGGCCGTGTTTTCCTGCACGGAGCACGTCAGAGCTGGACCCATGCACGACGGGGACTCGGCCCCCCGACTGGCGCGCCTTTCCGGACCCTGGTGTCGACAGCGGTGCCCAAGGACGTGCTGCTGTTCGAGCACGACCGGACCGGCTTCTTCCGCCTATTGGGCCTGTTCTGCGCCGCGCAGTTGCTGTTCTGGACCTACTTGGCCCACTTCGCCTACACGGAGCTGCGCGACACGGGCCTACGGGGCACCGTGATCATGGGCCAGGACGGCCAGAACCTGCCCAAGCTGGGCGGCGTGTCCCTCAACCTGGGGTCGGACCGCTGGAGATACGCCTTCACCGCAGGCTGTCTGACCGTCGgcAGTGTGATGGTGTCCGTCTCGCTGCTCTTCTCTCGGCGCTGTGTCCGCAGTGTGGTCCTGAAGCGAGGGGGGCAGCAGGTCACTGTGGTGACCCATGCCCTGGTGGGGGGACGGAGCTTCAGTGTGCCGCTCAGTCAGGTGACCTGCCATGCCCACCGCAGCGAGGTCGCTGCCCACATCCCCCTGCGTATCAAAGGTCACTCCCTCTACTATCTTCTGGACAGACAGGGCCGGCTGGCGAACCCACGGCTGTTCGACGTCACGGTGGGGGCGTACCGCACgctctga

Function

GO:

id name namespace
GO:0005657 replication fork cellular_component

KEGG:

id description
ko00970 Aminoacyl-tRNA biosynthesis
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015353 True 882 mRNA 0.65 2 8201563 8202566

Neighbor

gene id symbol gene type direction distance location
AMCG00015354 NA coding downstream 7933 8191510 ~ 8193630 (-)
AMCG00015352 NA coding downstream 11129 8177443 ~ 8190434 (-)
AMCG00015339 LOC106604708,LOC105028071,LOC106611761 coding downstream 26881 8166410 ~ 8174682 (-)
AMCG00015340 ovol1,LOC108267728,LOC103038355,LOC108434587,LOC107595316,LOC105029478,LOC107675488 coding downstream 44155 8151459 ~ 8157408 (-)
AMCG00015341 NA coding downstream 54649 8144499 ~ 8146914 (-)
AMCG00015349 NA coding upstream 303 8202869 ~ 8208366 (-)
AMCG00015355 NA coding upstream 24524 8227090 ~ 8228358 (-)
AMCG00015351 NA coding upstream 28672 8231238 ~ 8236784 (-)
AMCG00015347 NA coding upstream 47388 8249954 ~ 8259772 (-)
AMCG00015350 NA coding upstream 63230 8265796 ~ 8275867 (-)
G97409 gng3,LOC107559409 non-coding downstream 75099 8124268 ~ 8126464 (-)
G97395 NA non-coding downstream 132526 8068780 ~ 8069037 (-)
G97244 NA non-coding downstream 185490 8001486 ~ 8016073 (-)
G97221 NA non-coding downstream 230806 7969597 ~ 7970757 (-)
G97134 NA non-coding downstream 381374 7819804 ~ 7820189 (-)
G97475 NA non-coding upstream 229357 8431923 ~ 8433316 (-)
G97536 NA non-coding upstream 394169 8596735 ~ 8598299 (-)
G97561 NA non-coding upstream 408381 8610947 ~ 8611396 (-)
G97562 NA non-coding upstream 409929 8612495 ~ 8634660 (-)
G97574 NA non-coding upstream 452607 8655173 ~ 8656821 (-)
G97411 NA other downstream 67448 8131307 ~ 8134115 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other downstream 109737 8070035 ~ 8091826 (-)
G97125 NA other downstream 415121 7786087 ~ 7786442 (-)
AMCG00015305 NA other downstream 753269 7390889 ~ 7448294 (-)
AMCG00015288 NA other downstream 1277849 6917679 ~ 6923714 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 20633 8223199 ~ 8283629 (-)
AMCG00015361 NA other upstream 159048 8361614 ~ 8370031 (-)
G97455 mark2a,LOC107715377 other upstream 207421 8409987 ~ 8411882 (-)
AMCG00015374 NA other upstream 338622 8541188 ~ 8545795 (-)
AMCG00015372 lrfn4,LOC101077706,LOC106517947,LOC102210474,LOC101487083,LOC102311587 other upstream 376934 8579500 ~ 8582686 (-)

Expression


Co-expression Network