AMCG00015380


Basic Information

Item Value
gene id AMCG00015380
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8601327 ~ 8608308 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015380
GGGGATTGTTGTGTAACTCATGTTGTTGCATGCTGGGGCTACCttattgttgtgttgtggtgtgaCTGTTGTGGTGTCATTTGTGTCGATTGTGATTTGTTTCCTGCCGTTGTCTCTTGTCGTTGTCATCATTGTCGTCCGTTGCCTTGTGCGGTTGTGCAGGATGCCCGTGCAGCCGCCCGCAAAGGAGGTAGAGGAGATGGAGGTGGAGCCCGACTCGGCACTGGAGGCCAacggggaggaagaggaggaggaggaggagagcgaggGACACAGCCTCTCGGAGTTGGAGAGCGAGGCCGAGGAGGAGAGCTCTGagatgGATGACGAGGATTGCGAGAGGAGGAGAGTGGAGTGTCTGGACGAGATGTCAGATCTGGAGAAGCAGTTCCTCGACCTGAAGGAAAAGCTGTTCCGGGAGCGGCTGGCGCAGGTGCGAGTGAAGCTGGAGGAGGTGATGTCAGGGAAGGCGTCCGAGTACCAGGGACCCCTGTCTGCCCTCCACACCAACATGCGGCTGCGCACTGAGGTGGCAGGGCCCTACATTGTGTACAtgctgagagagacagacatccTGGAGGACTGGACCGCCATTAaaaagGCCGATAGAGGGCAGTATTCAGCACGCTGTGCAGATGGCACCCTGTATTACGAGGGCGAGAGCTACTGCAAAGGCAACTCCATCCTGCTGGATATTCGGGAGGAGGCACCCTCTCAGGCGGTGATCACAGCGGTCAGCACAGGGGAGGTGTGGCTGCGGCGGACAGACGGCAGCAAAACCAAGATCTACGTCTCCCAACTGCAGAAGGGAAAATATACCATCCGTAGAGCCTGAGAGAGGAAAGGGggatgtgagagagagagagagggagagagggggagagcagTGATGGGGTGGTGGAATGCATGGTGTCAGAGTCCCCACAGAGAATGAGGAAGCAGAGGCTCTTGGGAAAGCACAATctaaacaccccccccccacactgctCACCTCCCTCCCCTCATTCTAGAACCCCAGCTGGTTTCTAGAGCGACCCTCATGGTTCTAGAACACCACAGTCTAGATTCCGACTGCAGTCGTGTTTTGGTCGGAAACCAAAACGCACAACCAAACCACAACCTCACGTGGGTGAACTGTCACAAAAAGCAGCTGATTTACAGCTAgcatagaaaaaaaagtgtaatttgacTCATAGTATTTGACTCAAGGAcaccaattaagcaattaaggaGGTGAGAAGGATTTGGAATTGAACCCCAAACTCACAATTAACACCTAAATGACAGTTAAGGGGCGAGATAATGAAGAAACTCCCTAACTCtgttaattaatgtttgtttgtttttaatacaataacacaaaaaataacacTAATATTTCAACTTCAAAAGAATTACAGCTGCATTCCTgtgcccccccatccccctccctctcctaaAGATGcgcactgtattgtatttatattttctattgtGAAGGCCGAAGACAAATCCAAAGAATCATGTCTGAAGTGAAGACAAGAAAACTAaacagaactaaaaaaaaaagtttgaggtATCTGGTGAGATCGTTGTGTCGGGTTCAACAGAGTTCAGTTTCAAGACTCGCAGAGAACATCGAGAACCTTGAAGAAAAACGACAACTCACATCTCACCAGAGACCCTCCTTGTTTTACGGTTTAGAATTTGCACTTAATTAAGTCGAGAGCTAAATAGATCGATAGAGTCCAGTTCGCCAGGCCGGCTGCGTGCGGCTCCGCCACCCGACCACAACCATATGCATCCGCAGTGATGCTCTCTGCACAACCAAGTGGAGTGATGGCATCAtggtgataaaaataaaactctccTGTGGTTTGGTTTCTGTGGGCTGGCGGCGAGTGGACggtgctttttttaatgattaatttaagagttgtgttaattatgtatttatgatggCTTCCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015380 True 1950 mRNA 0.50 6 8601327 8608308

Neighbor

gene id symbol gene type direction distance location
AMCG00015375 NA coding downstream 65927 8534379 ~ 8535400 (-)
AMCG00015371 NA coding downstream 72645 8526032 ~ 8528682 (-)
AMCG00015373 NA coding downstream 106467 8486551 ~ 8494860 (-)
AMCG00015367 calm1,LOC102293206,LOC102778633,LOC107396020 coding downstream 119965 8479116 ~ 8481362 (-)
AMCG00015366 NA coding downstream 183551 8413410 ~ 8417776 (-)
AMCG00015379 ppp1r14b,LOC108268202 coding upstream 4948 8613256 ~ 8623716 (-)
AMCG00015387 LOC108267603,LOC106603153,LOC107583282,LOC107721660 coding upstream 59896 8668204 ~ 8671343 (-)
AMCG00015385 LOC108428058,LOC107568312,LOC107715375,LOC107669368 coding upstream 77459 8685767 ~ 8687647 (-)
AMCG00015386 NA coding upstream 125027 8733335 ~ 8734447 (-)
AMCG00015388 ppp2r5b,LOC107588189,LOC107749805 coding upstream 151557 8759865 ~ 8777414 (-)
G97536 NA non-coding downstream 3028 8596735 ~ 8598299 (-)
G97475 NA non-coding downstream 168011 8431923 ~ 8433316 (-)
G97409 gng3,LOC107559409 non-coding downstream 474863 8124268 ~ 8126464 (-)
G97395 NA non-coding downstream 532290 8068780 ~ 8069037 (-)
G97244 NA non-coding downstream 585254 8001486 ~ 8016073 (-)
G97561 NA non-coding upstream 2639 8610947 ~ 8611396 (-)
G97562 NA non-coding upstream 4187 8612495 ~ 8634660 (-)
G97574 NA non-coding upstream 46865 8655173 ~ 8656821 (-)
G97575 NA non-coding upstream 55767 8664075 ~ 8668051 (-)
G97589 NA non-coding upstream 110938 8719246 ~ 8719559 (-)
AMCG00015372 lrfn4,LOC101077706,LOC106517947,LOC102210474,LOC101487083,LOC102311587 other downstream 18641 8579500 ~ 8582686 (-)
AMCG00015374 NA other downstream 55532 8541188 ~ 8545795 (-)
G97455 mark2a,LOC107715377 other downstream 189445 8409987 ~ 8411882 (-)
AMCG00015361 NA other downstream 231296 8361614 ~ 8370031 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other downstream 317698 8223199 ~ 8283629 (-)
AMCG00015393 zgc:77262,LOC107715378,LOC107669316,LOC107568302,LOC108428054,LOC107567914,LOC108278748,LOC107700012 other upstream 181352 8789660 ~ 8794774 (-)
AMCG00015394 NA other upstream 220994 8829302 ~ 8838979 (-)
AMCG00015400 NA other upstream 346205 8954513 ~ 8960144 (-)
AMCG00015409 NA other upstream 430288 9038596 ~ 9040141 (-)
AMCG00015415 NA other upstream 543910 9152218 ~ 9156447 (-)

Expression


Co-expression Network