G11345


Basic Information

Item Value
gene id G11345
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 8320697 ~ 8321042 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14045
TAAAAATTGAGTAATATGTCAAAATGTACAACTATCAACCATACCCATTTAGTCATAAATAGGAGACTTAcctaatattttaagaaaagctATGTAAAGTAagatatgtgtatatgtgaCCAGTAAGAACAAAAGGAACTAAACTACATAGTTTGTATTTCTTAGTCAATTGATGCAGAGAAAAAGTATGGAGTAGAATTAAACTTGGATATACAAATGTTGCAATGCTTACTGTTATAACAGACACTCCTGCCGTTGTGCTATTGGGCTTGGGACCTGTATTGAAGTGTTTCTTGATCTTCCCAGCTACAGAGAGTTGATGTTCATTCTCTGGCATCCCATCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14045 True 346 lncRNA 0.34 1 8320697 8321042

Neighbor

gene id symbol gene type direction distance location
AMCG00016118 NA coding downstream 181634 8138734 ~ 8139063 (-)
AMCG00016111 NA coding downstream 285945 8030925 ~ 8034752 (-)
AMCG00016107 frem2b,LOC106581006,LOC106612873,LOC108433801 coding downstream 704399 7608507 ~ 7616298 (-)
AMCG00016108 LOC107730863,LOC107704782,LOC103363427,LOC101479746,LOC102203644 coding downstream 746217 7529911 ~ 7574480 (-)
AMCG00016105 NA coding downstream 794443 7520166 ~ 7526254 (-)
AMCG00016125 NA coding upstream 34637 8355679 ~ 8357486 (-)
AMCG00016127 NA coding upstream 95208 8416250 ~ 8433185 (-)
AMCG00016129 LOC106612894,LOC102298628,LOC102206684,LOC101482631 coding upstream 114078 8435120 ~ 8494583 (-)
AMCG00016130 nbeaa,nbea,LOC107691681,LOC107588988 coding upstream 273048 8594090 ~ 8644348 (-)
AMCG00016131 nbeaa coding upstream 336160 8657202 ~ 8671178 (-)
G11314 NA non-coding downstream 146723 8173689 ~ 8173974 (-)
G11309 NA non-coding downstream 182027 8136414 ~ 8138670 (-)
G11300 NA non-coding downstream 195314 8124990 ~ 8125383 (-)
G11288 NA non-coding downstream 225493 8093800 ~ 8095204 (-)
G11247 NA non-coding downstream 353392 7967071 ~ 7967305 (-)
G11346 NA non-coding upstream 5140 8326182 ~ 8331803 (-)
G11482 NA non-coding upstream 734862 9055904 ~ 9059100 (-)
G11571 NA non-coding upstream 992958 9314000 ~ 9314447 (-)
G11633 hmgb1,LOC105901051,LOC103353583 non-coding upstream 1114760 9435802 ~ 9498753 (-)
G11650 NA non-coding upstream 1222466 9543508 ~ 9543743 (-)
G11326 NA other downstream 126265 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 196664 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 567260 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 3390797 4903856 ~ 4929900 (-)
AMCG00016049 NA other downstream 4400194 3886298 ~ 3920503 (-)
AMCG00016134 NA other upstream 502503 8823545 ~ 8827760 (-)
AMCG00016176 NA other upstream 2513370 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 3445110 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 3511386 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 4002119 12323161 ~ 12329033 (-)

Expression


Co-expression Network