AMCG00018281


Basic Information

Item Value
gene id AMCG00018281
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 6731610 ~ 6732494 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018281
ATGGCAGCTGGGGTTATTCGTACCCTGACCGATTTCCGACTCGCCATGTCATTCCAACACCCCTTCTACAGCCCTGCAGACAACCAGGCGGACATGGACTTCCAGGATGCTTCtactgaggaggaggaagaggatgaagaggaggaaCAGCGattgggagaggaggaggagatggaggaagaggaagaggaggagggagagtcCTCTTGCCTGGTGTCAGGACAGGTGGGCGGTGAGGCCCCTAGCAGTGCCGAGGTGACCTACCGTTTGCTGCGCTTTGTGGACCTCATCAACGGCGACATCCAGCGCTACTTCGGTCGGAAGAGCAAAGACGAGGACCCGGACGCCTGCGACATCTACGAGGACAGGGACCGACTCTTCCCATGCAAATCTGGACGAGAACGCTACTACGCCGACCTGGTGAAGATGGCTCAAACgggggagcaggaggaagaagaggcGCCACACAGCCCCCTCACCCCTCCAGGAGAGGCAGACTGTCAGGTCCTGAGGGCCCTGTGCAGCCAGGAGCACACCCAACAGCTGGGGCCCCTGGCCGAGCTCTTCGACTACGGCCTGCGCAGATACATCAAGCCCCAGAGCCGAGGGCCCAAGCAAGGGAAGCGACACAAAGGGGACCGGAAACATACACAGGTAGTGCCCATGTACAAACGCAGGCTCCCCCCAAGTTTCTGGGCCGAGCCGTCCCCCAACCCCGCTTGCTTGCTCGGTGCCCCCAACACCCCCGACTTCAGTGACCTCCTTGCCAACTGGACCTCGGAGAACAGCCACGAGCTCCAGGGTGAGGGCCGGGACTCTCCCAACGAGCTGAACAGACAGACGCTGGAGACCGCACACATCATAGCCAGCTGGGGCGAGCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018281 True 885 mRNA 0.61 1 6731610 6732494

Neighbor

gene id symbol gene type direction distance location
AMCG00018282 NA coding upstream 27479 6688637 ~ 6704131 (+)
AMCG00018279 usp7 coding upstream 113992 6599598 ~ 6617618 (+)
AMCG00018278 grin2a,LOC107690256,LOC107733867 coding upstream 366370 6339451 ~ 6365240 (+)
AMCG00018276 grin2a,LOC107685916,LOC108413991,LOC107690256 coding upstream 421767 6306395 ~ 6309843 (+)
AMCG00018277 grin2a,LOC107568390,LOC107690256,LOC107685916,LOC108413991 coding upstream 482070 6249124 ~ 6249540 (+)
AMCG00018295 NA coding downstream 52756 6785250 ~ 6790463 (+)
AMCG00018297 naa60 coding downstream 59560 6792054 ~ 6798225 (+)
AMCG00018296 carhsp1,LOC107733846,LOC107576530,LOC107590589 coding downstream 82940 6815434 ~ 6818771 (+)
AMCG00018294 NA coding downstream 95197 6827691 ~ 6828740 (+)
AMCG00018300 NA coding downstream 151441 6883935 ~ 6899668 (+)
G115439 NA non-coding upstream 53257 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding upstream 64387 6658533 ~ 6667223 (+)
G115419 NA non-coding upstream 111513 6618178 ~ 6620097 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding upstream 143201 6525719 ~ 6588409 (+)
G115331 LOC100136012 non-coding upstream 685076 6046030 ~ 6046534 (+)
G115467 NA non-coding downstream 1213 6733707 ~ 6780046 (+)
G115481 NA non-coding downstream 39938 6772432 ~ 6773263 (+)
G115511 NA non-coding downstream 96594 6829088 ~ 6833312 (+)
G115514 NA non-coding downstream 105212 6837706 ~ 6838861 (+)
G115535 NA non-coding downstream 353080 7085574 ~ 7086966 (+)
AMCG00018272 NA other upstream 570994 6155488 ~ 6160616 (+)
G115299 NA other upstream 780593 5949463 ~ 5951017 (+)
G115049 NA other upstream 1967705 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 2127505 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 2538280 4186410 ~ 4193330 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 1161133 7893627 ~ 7894449 (+)
G115648 NA other downstream 1387284 8119778 ~ 8122171 (+)
G115789 NA other downstream 1960870 8693364 ~ 8694719 (+)
AMCG00018358 polr3k,rpc11 other downstream 2467163 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 2507317 9239811 ~ 9245234 (+)

Expression


Co-expression Network