AMCG00020869


Basic Information

Item Value
gene id AMCG00020869
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35405143 ~ 35412795 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020869
GCCGGCTGCTAGCAATCGGACAAAGAACGTTAGTCACTGACGCCATTGTGGCTCGAGCACAGGAAAAGGCAAATGGCACCCAGGGTCGGGAGTTTGGAGCCAAAATGGCGATTTCTAGGAGCCAGATTCCACACGCTCGCTGTATGACTCGATGAATCGTTCCCGGCAGGGTAGGCTGCAGCGCGGAGGGGGCATCACATGACTCGCACAGAGCCCAGCTGCCCAAATCCAATATGGTGGCTAGCTTGGCAGGCTTACGGTTCTTGTTGATTATTGTGTTCCTCTGCGGGTTGGGGTTCGGCGCCAACGGCCAGCTGGCCCCGCAAGTGCTGGGGCTCAGGCTGGAGGACCCCGGCGGCCAGATCTTCATGCGGAAGGGGGTGCTAACGGCGCCCTACGGAGCCACTTTTCAGCTGCGGCTGTTTGGGTCTCACTTGCTTAACGAGACCTGGCCGCTAGTAGCGTTCGCCGAGGAGCCGGAGGGGGAGGCTGGTGCCCCCGACCCGTGCGAGGGACAGGGCGCCAGGAGCTCCGCTGTGTTCAGGGTCGAGAGCGGCTTTCACCCTGATGGGGAGTCCAGCGGGCTGATTACAGTGAAGACCGAGGAGAGGAGAACCGCCGTTAAATCCGAGGGAGGAGGGGGTTTATATCGCTTGTGCGTCGGGAGCGGCGAGAAATGGGCATCATTTGGGCAGGATAGGCTGCTGGTGGTGGAGGAGCCGCCTGAGCCCGACTACATCCCCGTGTGGGGGCTGGCGCTGGGCGtcgcgctgctgctgctggcctGCGCCGTGTTCAAGAGCCTGAACCTCAGCCTGCTGTGGCTGGACCCCCTGGAGCTGTACGTGCTGCACAGCTGCGGCTCCGAGCGGGACAAGAAGTCGGCCAAACGGCTGGAGCCACTCCGCCGGCGGGGCAACTTTCTCCTCTGCTCCCTGCTCTTCCTCTGCGCCCTGGGGCACTCCGCCCTGGGGGTGCTGTTCTACCGGGCCCTGGGCTCCGTGGCCCCCGCGGTGTTCCTCTGCGGCTTACTGGTGTTCCTCGTCTCCGAGCTGCTGCCCCACGTCCTCTGCTCCGGCTACGGGTTCAAGCTTGCGCCTGGGATGGCGTGGCTGGGCCAGGTGTGCATGGTGCTCACCTGCCCGCTGTCCTGCCCGCTGGGGCTGCTGCTGGACCTGGCGCTGCGCCGTGATGCCAGCACCTGCTGTGTGCGGGAGAAGATCATGGAGATGATGCGGACCAGCGACCCGTACAACGAGTTTGTGAAGGAGGAGTTCAGCCGAGGAGCGCTGCGGACCAAGACCGTGGAAGACATCCTGACGCCGCTGAAGGACTGCTTCATGCTGTCCTCCGTCGCCGTGCTGGACTTCGGCACCATGTCGGAGATCATGCAGAGCGGCTACAACCGGGTGCCCGTGTACGAGGACGAGCGCTCCAACATCGTGGACATCCTGTACGTCAAGGACCTGGCGCTGGTGGACCCGGAGGACCACACGCCCATGAGCACCATCACCAAGTTCTACAACCACCCGCTGCACTTCGTCTTCAACGACACCAAGCTGGACGCCATGCTCGAGGAGTTCAAGAAAGGTAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGGGAGGGAGACCCGTTCTATGAGGTGCTGGGGCTCGTCACGCTGGAGGACGTCATTGAGGAGATCATCAAGTCTGAGATCCTGGATGAGTCGGACGGATACATGGATATGAAGGTGAAGCGCCCCCTCCCTCCTATGGAGCTGCCACAGGCCACCCCCCGGGAGGACTGCTCTCTGTTCAAGGTACCTGAGGGAGACCTGAAGGTGCGCACCTCCCCACAGCTGCTGCTCGCCACACACCGCTTCCTGTCCCGAGGCAAGGCTGAccgactgtAGGTGGAGCACTTTGGTCCCCCCCGTGTGTCAGAGAAGGTCTTGCTCCATCTGCTCAAACACCCCAGTGTCAACCAGGAGGTGAAGTTCGACCCCAGTAACCGGCTGAGCTCCGAGCACTACCTGTACACCCGCAACCACCCTGTTGACTACTTCATACTGCTGCTGCAGggtcgAGTGGAGGTGGAGATCGGAAAAGAGGGGCTGAAGTTTGAGAACGGAGCCTTCACCTACTACGGCGTCTCTGCCCTGACGGCACCATCCTCAGTGCACCAGTCCCCTGTGTCCACGCAGCGCCGGACCCCCCAGGATCCCTTCGAGCTGGCAGACCTGAGCCCCTCGGCCTACTGCCCCGACTACACCGTGCGCGCTCTGACTGACCTGCAGTTCATCAGGGTGACCCGGATGCAGTATCTGAACGCCCTCATGGCCTCCCGTATCAGCACCACGACCCCGACCCCGACCCCGACCCCGACCCTTGACCCCCCTGAGATCAAGGTCGTCCCCAACAGCCAGACCAAGCTGCTCAATGAGAGGAACGCCAACACAGGGCGTCAGGCATAG

Function

GO: NA

KEGG:

id description
K16302 CNNM; metal transporter CNNM

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020869 True 2468 mRNA 0.63 8 35405143 35412795

Neighbor

gene id symbol gene type direction distance location
AMCG00020868 NA coding upstream 3619 35376270 ~ 35401524 (+)
AMCG00020863 LOC102779543,LOC108260282,LOC102217523,LOC106917416,LOC103149690,LOC106950839,LOC103473804,LOC101061943 coding upstream 48627 35354706 ~ 35356516 (+)
AMCG00020864 NA coding upstream 117325 35277860 ~ 35287818 (+)
AMCG00020859 NA coding upstream 229530 35173026 ~ 35175613 (+)
AMCG00020857 purb,LOC104936618 coding upstream 233042 35171052 ~ 35172101 (+)
AMCG00020872 NA coding downstream 3257 35416052 ~ 35416845 (+)
AMCG00020875 NA coding downstream 314957 35727752 ~ 35736989 (+)
AMCG00020883 LOC106579887,LOC106585549 coding downstream 407361 35820156 ~ 35827073 (+)
AMCG00020884 NA coding downstream 438844 35851639 ~ 35859695 (+)
AMCG00020891 NA coding downstream 496557 35909352 ~ 35926494 (+)
G66151 NA non-coding upstream 234868 35167068 ~ 35170275 (+)
G66072 NA non-coding upstream 378914 35025003 ~ 35026229 (+)
G65995 NA non-coding upstream 654992 34749498 ~ 34750151 (+)
G65996 NA non-coding upstream 655800 34749127 ~ 34749343 (+)
G65994 NA non-coding upstream 657029 34746893 ~ 34748114 (+)
G66231 NA non-coding downstream 20473 35433268 ~ 35433558 (+)
G66258 NA non-coding downstream 140108 35552903 ~ 35553230 (+)
G66290 NA non-coding downstream 303250 35716045 ~ 35716249 (+)
G66319 NA non-coding downstream 345313 35758108 ~ 35761032 (+)
G66325 NA non-coding downstream 355446 35768241 ~ 35768571 (+)
G66149 NA other upstream 240158 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 255725 35147603 ~ 35149418 (+)
G66060 NA other upstream 396821 34967844 ~ 35008322 (+)
G66008 NA other upstream 617669 34784212 ~ 34787474 (+)
AMCG00020820 NA other upstream 993523 34404534 ~ 34411620 (+)
AMCG00020874 NA other downstream 334361 35747156 ~ 35750446 (+)
G66362 NA other downstream 454598 35867393 ~ 35908402 (+)
G66506 NA other downstream 841904 36254699 ~ 36256511 (+)
G66551 NA other downstream 1502020 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 2154241 37567036 ~ 37575856 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_038594 CABZ01071056.1 coding NW_008805502.1 KN150361.1 21 ~ 16031 (-)